FFCP PHASE1:Hg19::chr3:182872144..182872153,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:182872144..182872153,- | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr3:182872144..182872153,- | |description=CAGE_peak_at_chr3:182872144..182872153,- | ||
|id=chr3:182872144..182872153,- | |id=chr3:182872144..182872153,- | ||
|ontology_enrichment_celltype=CL:0000990!8.76e-12!8;CL:0000451!2.12e-09!10;CL:0000453!2.67e-08!5 | |ontology_enrichment_celltype=CL:0000990!8.76e-12!8;CL:0000451!2.12e-09!10;CL:0000453!2.67e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.61e-40;5!CL:0000990;1.38e-22;8!CL:0000451;1.52e-18;10!CL:0001014;1.81e-07;2!CL:0001016;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.58e-40,5;CL:0000990,1.05e-22,8;CL:0000451,1.21e-18,10;CL:0001014,1.64e-07,2;CL:0001016,1.64e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;5.49e-14;1!DOID:630;1.18e-13;1!DOID:0050177;1.18e-13;1!DOID:0050427;1.18e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,5.85e-14,1;DOID:630,6.65e-14,1;DOID:0050177,6.65e-14,1;DOID:0050427,6.65e-14,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;4.25e-14;1!UBERON:0006518;4.25e-14;1!UBERON:0008949;4.25e-14;1!UBERON:0000101;4.25e-14;1!UBERON:0002167;4.25e-14;1!UBERON:0006562;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.53e-14,1;UBERON:0006518,4.53e-14,1;UBERON:0008949,4.53e-14,1;UBERON:0000101,4.53e-14,1;UBERON:0002167,4.53e-14,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.229240217243854,0.246301768349837,0.550975469195755,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.580418477257168,1.13477044938228,0.622822248995575,0,0,0,1.21079900526674,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.541607727530031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.721832238805369,0.925971025153221,2.85381228351897,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,1.47329582297434,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0.353024506766001,0,0,0.19871461170299,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,1.349843349309,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,1.06787412567695,0,4.14239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0.521988583930423,0,0,0,0,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,10.3275963684876,1.59437808376036,9.15966207832728,0.327609848846413,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0.127894371303652,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0,0.20170506870352,0.781514011233092,0,2.12903492763126,0.147856086217045,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0,0.230467975111559,0,0,0,0,0.222462803784138,0,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0,0,0,0,0,0.754814217833368,0,0,0.470317296361523,0,0.942706188406504,0,0,0,0,0,0,4.69723432847166,0.71421575442263,0.352894871715692,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0.0918948995348449,0,0.0757786982182394,1.33982065078089,0,0,0,0.23806443146374,0.322944549180031,0,0,0.0636471582781649,0,0,0,0.202056159043763,0,0,0,0.533636729388577,0,0,0,0,0,0,0,1.60284246151616 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| ||
|short_description=p@chr3:182872144..182872153,- | |short_description=p@chr3:182872144..182872153,- | ||
}} | }} |
Latest revision as of 18:41, 29 July 2015
Short description: | p@chr3:182872144..182872153, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:182872144..182872153, - |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.58e-40 | 5 |
conventional dendritic cell | 1.05e-22 | 8 |
dendritic cell | 1.21e-18 | 10 |
CD1a-positive Langerhans cell | 1.64e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.53e-14 | 1 |
right lung lobe | 4.53e-14 | 1 |
lower lobe of lung | 4.53e-14 | 1 |
lobe of lung | 4.53e-14 | 1 |
right lung | 4.53e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 5.85e-14 | 1 |
genetic disease | 6.65e-14 | 1 |
monogenic disease | 6.65e-14 | 1 |
xeroderma pigmentosum | 6.65e-14 | 1 |