FFCP PHASE1:Hg19::chr3:182872116..182872132,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:182872116..182872132,-
|short_description=p@chr3:182872116..182872132,-
|description=CAGE_peak_at_chr3:182872116..182872132,-
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:182872116..182872132,- | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr3:182872116..182872132,- | |||
|id=chr3:182872116..182872132,- | |||
|ontology_enrichment_celltype=CL:0000990!5.61e-11!8;CL:0000453!1.62e-09!5;CL:0000451!1.26e-08!10;CL:0000039!7.27e-07!7;CL:0000586!7.27e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000453;7.13e-37;5!CL:0000990;1.89e-20;8!CL:0000451;1.05e-16;10!CL:0001014;2.40e-15;2!CL:0001016;2.40e-15;2!CL:0002138;1.76e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.16e-37,5;CL:0000990,1.58e-20,8;CL:0000451,9.05e-17,10;CL:0001014,1.80e-15,2;CL:0001016,1.80e-15,2;CL:0005020,1.50e-11,6;CL:0002138,1.50e-11,6;CL:0005022,1.50e-11,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.76e-11;6!UBERON:0005425;2.29e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!3.56e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3112;2.29e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.28e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;8.45e-09;1!UBERON:0006518;8.45e-09;1!UBERON:0008949;8.45e-09;1!UBERON:0000101;8.45e-09;1!UBERON:0002167;8.45e-09;1!UBERON:0001473;9.89e-09;8!UBERON:0004536;9.89e-09;8!UBERON:0006558;9.89e-09;8!UBERON:0000941;2.29e-08;1!UBERON:0001785;2.29e-08;1!UBERON:0002464;2.29e-08;1!UBERON:0004904;2.29e-08;1!UBERON:0001021;2.29e-08;1!UBERON:0002465;4.50e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,7.56e-09,1;UBERON:0006518,7.56e-09,1;UBERON:0008949,7.56e-09,1;UBERON:0000101,7.56e-09,1;UBERON:0002167,7.56e-09,1;UBERON:0002405,7.89e-09,93;UBERON:0001473,8.79e-09,8;UBERON:0004536,8.79e-09,8;UBERON:0006558,8.79e-09,8;UBERON:0000941,2.29e-08,1;UBERON:0001785,2.29e-08,1;UBERON:0002464,2.29e-08,1;UBERON:0004904,2.29e-08,1;UBERON:0001021,2.29e-08,1;UBERON:0003902,2.29e-08,1;UBERON:0005425,2.29e-08,1;UBERON:0002193,2.54e-07,108;UBERON:0002465,4.10e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.164201178899891,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0.199463657621632,0.852449501065388,1.45104619314292,1.70215567407342,3.11411124497787,0,0,0,1.21079900526674,1.47311054395026,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0.66944122552934,0.402829317109147,0,0.976248230192678,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0,0,0.325808305310325,0,0,0,0,2.16549671641611,1.85194205030644,3.04406643575357,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0,0,0,0.127612712494584,1.31505115112215,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0.46112780877612,0.0897576444097721,1.19512109114209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.569219092059585,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0.353024506766001,0,0,0,0,0.391102765469606,0,0,0.19980960958213,1.58499458869517,0.229073192331831,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,2.249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,2.45611048905698,3.30129040709298,3.72815149812476,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0.643324774124777,0.782982875895635,0,0,0.734210113519403,0,0.308801447160972,0,0,0,0.168942440653073,0,0.345430341731199,0,0,23.7729576784054,6.37751233504143,16.3565394255844,0,0,0.422624246717254,0,0,0,0,0,0,0,0.255788742607303,0,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.196295437002051,0,0,0,0,0,0,0,0,0,0.261906694481422,1.14640342257068,0.147856086217045,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0.460935950223117,0,0,0,0,0.111231401892069,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0.11294608203896,0,1.50962843566674,0,0,0.470317296361523,0.245148321753905,0.942706188406504,0,0,0,0,0.0939839179798536,0,6.09641051142066,0.892769693028288,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,1.06886962106224,0.0918948995348449,0,0.151557396436479,0.803892390468535,0,0,0,0,0.710478008196067,0.434523000071005,0,0.381882949668989,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.640364075266293,0,0,0,0,0,0,0.603821380773079,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.164201178899891,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0.199463657621632,0.852449501065388,1.45104619314292,1.70215567407342,3.11411124497787,0,0,0,1.21079900526674,1.47311054395026,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0.66944122552934,0.402829317109147,0,0.976248230192678,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0,0,0.325808305310325,0,0,0,0,2.16549671641611,1.85194205030644,3.04406643575357,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0,0,0,0.127612712494584,1.31505115112215,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0.46112780877612,0.0897576444097721,1.19512109114209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.569219092059585,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0.353024506766001,0,0,0,0,0.391102765469606,0,0,0.19980960958213,1.58499458869517,0.229073192331831,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,2.249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,2.45611048905698,3.30129040709298,3.72815149812476,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0.643324774124777,0.782982875895635,0,0,0.734210113519403,0,0.308801447160972,0,0,0,0.168942440653073,0,0.345430341731199,0,0,23.7729576784054,6.37751233504143,16.3565394255844,0,0,0.422624246717254,0,0,0,0,0,0,0,0.255788742607303,0,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.196295437002051,0,0,0,0,0,0,0,0,0,0.261906694481422,1.14640342257068,0.147856086217045,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0.460935950223117,0,0,0,0,0.111231401892069,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0.11294608203896,0,1.50962843566674,0,0,0.470317296361523,0.245148321753905,0.942706188406504,0,0,0,0,0.0939839179798536,0,6.09641051142066,0.892769693028288,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,1.06886962106224,0.0918948995348449,0,0.151557396436479,0.803892390468535,0,0,0,0,0.710478008196067,0.434523000071005,0,0.381882949668989,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.640364075266293,0,0,0,0,0,0,0.603821380773079,0.961705476909699 | ||
|short_description=p@chr3:182872116..182872132,- | |||
}} | }} |
Latest revision as of 18:41, 29 July 2015
Short description: | p@chr3:182872116..182872132, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:182872116..182872132, - |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.16e-37 | 5 |
conventional dendritic cell | 1.58e-20 | 8 |
dendritic cell | 9.05e-17 | 10 |
CD1a-positive Langerhans cell | 1.80e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.80e-15 | 2 |
lymphangioblast | 1.50e-11 | 6 |
endothelial cell of lymphatic vessel | 1.50e-11 | 6 |
vascular lymphangioblast | 1.50e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 7.56e-09 | 1 |
right lung lobe | 7.56e-09 | 1 |
lower lobe of lung | 7.56e-09 | 1 |
lobe of lung | 7.56e-09 | 1 |
right lung | 7.56e-09 | 1 |
immune system | 7.89e-09 | 93 |
lymphatic vessel | 8.79e-09 | 8 |
lymph vasculature | 8.79e-09 | 8 |
lymphatic part of lymphoid system | 8.79e-09 | 8 |
cranial nerve II | 2.29e-08 | 1 |
cranial nerve | 2.29e-08 | 1 |
nerve trunk | 2.29e-08 | 1 |
nerve connecting eye with brain | 2.29e-08 | 1 |
nerve | 2.29e-08 | 1 |
retinal neural layer | 2.29e-08 | 1 |
presumptive neural retina | 2.29e-08 | 1 |
hemolymphoid system | 2.54e-07 | 108 |
lymphoid system | 4.10e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.28e-08 | 1 |