FFCP PHASE1:Hg19::chr3:182871897..182871916,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:182871897..182871916,- | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_at_chr3:182871897..182871916,- | |description=CAGE_peak_at_chr3:182871897..182871916,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000453!1.95e-09!5;CL:0000990!2.65e-09!8;CL:0002057!9.23e-08!42;CL:0000451!2.48e-07!10;CL:0000860!6.15e-07!45 | |ontology_enrichment_celltype=CL:0000453!1.95e-09!5;CL:0000990!2.65e-09!8;CL:0002057!9.23e-08!42;CL:0000451!2.48e-07!10;CL:0000860!6.15e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.08e-31;5!CL:0000990;9.58e-18;8!CL:0002138;1.27e-14;6!CL:0000451;1.46e-14;10 | |ontology_enrichment_celltype_v019=CL:0000453;1.08e-31;5!CL:0000990;9.58e-18;8!CL:0002138;1.27e-14;6!CL:0000451;1.46e-14;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.12e-31,5;CL:0000990,9.80e-18,8;CL:0005020,1.24e-14,6;CL:0002138,1.24e-14,6;CL:0005022,1.24e-14,6;CL:0000451,1.49e-14,10 | |||
|ontology_enrichment_development_v019=CL:0005022;1.27e-14;6 | |ontology_enrichment_development_v019=CL:0005022;1.27e-14;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;5.04e-11;1 | |ontology_enrichment_disease_v019=DOID:3112;5.04e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,5.57e-11,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.93e-11;1!UBERON:0006518;2.93e-11;1!UBERON:0008949;2.93e-11;1!UBERON:0000101;2.93e-11;1!UBERON:0002167;2.93e-11;1!UBERON:0001473;4.13e-11;8!UBERON:0004536;4.13e-11;8!UBERON:0006558;4.13e-11;8!UBERON:0002465;5.39e-09;10 | |ontology_enrichment_uberon_v019=UBERON:0002171;2.93e-11;1!UBERON:0006518;2.93e-11;1!UBERON:0008949;2.93e-11;1!UBERON:0000101;2.93e-11;1!UBERON:0002167;2.93e-11;1!UBERON:0001473;4.13e-11;8!UBERON:0004536;4.13e-11;8!UBERON:0006558;4.13e-11;8!UBERON:0002465;5.39e-09;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.79e-11,1;UBERON:0006518,2.79e-11,1;UBERON:0008949,2.79e-11,1;UBERON:0000101,2.79e-11,1;UBERON:0002167,2.79e-11,1;UBERON:0001473,4.06e-11,8;UBERON:0004536,4.06e-11,8;UBERON:0006558,4.06e-11,8;UBERON:0002465,5.32e-09,10;UBERON:0002405,5.96e-07,93 | |||
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| ||
|short_description=p@chr3:182871897..182871916,- | |short_description=p@chr3:182871897..182871916,- | ||
}} | }} |
Latest revision as of 18:40, 29 July 2015
Short description: | p@chr3:182871897..182871916, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:182871897..182871916, - |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.12e-31 | 5 |
conventional dendritic cell | 9.80e-18 | 8 |
lymphangioblast | 1.24e-14 | 6 |
endothelial cell of lymphatic vessel | 1.24e-14 | 6 |
vascular lymphangioblast | 1.24e-14 | 6 |
dendritic cell | 1.49e-14 | 10 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.79e-11 | 1 |
right lung lobe | 2.79e-11 | 1 |
lower lobe of lung | 2.79e-11 | 1 |
lobe of lung | 2.79e-11 | 1 |
right lung | 2.79e-11 | 1 |
lymphatic vessel | 4.06e-11 | 8 |
lymph vasculature | 4.06e-11 | 8 |
lymphatic part of lymphoid system | 4.06e-11 | 8 |
lymphoid system | 5.32e-09 | 10 |
immune system | 5.96e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 5.57e-11 | 1 |