FFCP PHASE1:Hg19::chr3:170415995..170416015,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:170415995..170416015,+ | |||
|description=CAGE_peak_at_chr3:170415995..170416015,+ | |description=CAGE_peak_at_chr3:170415995..170416015,+ | ||
|id=chr3:170415995..170416015,+ | |id=chr3:170415995..170416015,+ | ||
|ontology_enrichment_celltype=CL:1000306!6.55e-14!4;CL:0002547!6.55e-14!4;CL:0000359!3.09e-12!32;CL:0000192!1.11e-08!42;CL:0000514!1.11e-08!42;CL:0002593!1.46e-07!2 | |ontology_enrichment_celltype=CL:1000306!6.55e-14!4;CL:0002547!6.55e-14!4;CL:0000359!3.09e-12!32;CL:0000192!1.11e-08!42;CL:0000514!1.11e-08!42;CL:0002593!1.46e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.22e-30;4!CL:0002547;1.22e-30;4!CL:0000359;2.84e-10;32!CL:0002589;3.56e-08;2!CL:0002575;4.37e-08;2!CL:0002593;6.80e-08;2!CL:0000192;4.20e-07;43!CL:0000077;7.05e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,8.56e-31,4;CL:0002547,8.56e-31,4;CL:0000359,2.80e-10,32;CL:0002589,3.56e-08,2;CL:0002575,4.38e-08,2;CL:0002593,9.19e-08,2;CL:0000192,1.24e-07,43;CL:0000514,1.24e-07,43;CL:0000077,7.05e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;4.20e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.30e-14!42;UBERON:0003509!3.30e-14!42;UBERON:0004572!3.30e-14!42;UBERON:0000415!6.55e-14!4;UBERON:0007240!6.55e-14!4;UBERON:0005742!6.55e-14!4;UBERON:0005734!6.55e-14!4;UBERON:0004664!6.55e-14!4;UBERON:0004663!6.55e-14!4;UBERON:0004573!4.11e-12!33;UBERON:0004571!4.11e-12!33;UBERON:0000025!1.08e-11!194;UBERON:0001981!1.44e-11!60;UBERON:0007500!1.44e-11!60;UBERON:0004537!1.44e-11!60;UBERON:0006965!1.44e-11!60;UBERON:0002049!2.73e-11!79;UBERON:0007798!2.73e-11!79;UBERON:0003075!7.07e-10!86;UBERON:0007284!7.07e-10!86;UBERON:0000477!1.22e-09!286;UBERON:0000483!1.37e-09!309;UBERON:0000055!1.60e-09!69;UBERON:0000119!2.13e-09!312;UBERON:0002346!3.12e-09!90;UBERON:0007023!4.96e-09!115;UBERON:0000947!5.07e-09!21;UBERON:0010191!5.07e-09!21;UBERON:0002616!7.37e-09!59;UBERON:0005743!1.05e-08!86;UBERON:0004111!1.62e-08!241;UBERON:0000073!1.79e-08!94;UBERON:0001016!1.79e-08!94;UBERON:0001017!3.21e-08!82;UBERON:0004872!3.67e-08!84;UBERON:0000955!5.06e-08!69;UBERON:0006238!5.06e-08!69;UBERON:0001049!5.45e-08!57;UBERON:0005068!5.45e-08!57;UBERON:0006241!5.45e-08!57;UBERON:0007135!5.45e-08!57;UBERON:0004535!1.11e-07!110;UBERON:0002456!1.46e-07!2;UBERON:0002780!1.53e-07!41;UBERON:0001890!1.53e-07!41;UBERON:0006240!1.53e-07!41;UBERON:0001009!2.38e-07!113;UBERON:0003080!2.59e-07!42;UBERON:0003056!3.02e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.22e-30;4!UBERON:0000415;1.22e-30;4!UBERON:0007240;1.22e-30;4!UBERON:0005742;1.22e-30;4!UBERON:0005734;1.22e-30;4!UBERON:0004664;1.22e-30;4!UBERON:0004663;1.22e-30;4!UBERON:0004573;7.32e-21;33!UBERON:0004571;7.32e-21;33!UBERON:0000947;8.53e-16;21!UBERON:0010191;8.53e-16;21!UBERON:0001637;2.23e-14;42!UBERON:0003509;2.23e-14;42!UBERON:0004572;2.23e-14;42!UBERON:0007500;2.79e-09;56!UBERON:0001981;2.79e-09;56!UBERON:0004537;2.79e-09;56!UBERON:0001529;3.56e-08;2!UBERON:0007204;3.56e-08;2!UBERON:0002360;6.80e-08;2!UBERON:0000094;6.80e-08;2!UBERON:0002456;6.80e-08;2!UBERON:0010743;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,8.56e-31,4;UBERON:0007240,8.56e-31,4;UBERON:0005742,8.56e-31,4;UBERON:0005734,8.56e-31,4;UBERON:0004664,8.56e-31,4;UBERON:0004663,8.56e-31,4;UBERON:0004573,6.27e-25,33;UBERON:0004571,6.27e-25,33;UBERON:0001637,1.90e-19,42;UBERON:0003509,1.90e-19,42;UBERON:0004572,1.90e-19,42;UBERON:0004797,6.60e-18,7;UBERON:0000947,8.15e-16,21;UBERON:0010191,8.15e-16,21;UBERON:0007500,1.22e-13,59;UBERON:0001981,1.22e-13,59;UBERON:0004537,1.22e-13,59;UBERON:0006965,1.22e-13,59;UBERON:0000055,9.81e-12,68;UBERON:0002049,3.94e-10,78;UBERON:0007798,3.94e-10,78;UBERON:0004872,1.79e-09,83;UBERON:0001529,3.56e-08,2;UBERON:0007204,3.56e-08,2;UBERON:0002360,8.60e-08,2;UBERON:0000094,8.60e-08,2;UBERON:0010743,8.60e-08,2;UBERON:0002456,9.19e-08,2;UBERON:0004535,5.11e-07,109;UBERON:0001009,8.29e-07,112 | |||
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| ||
|short_description=p@chr3:170415995..170416015,+ | |short_description=p@chr3:170415995..170416015,+ | ||
}} | }} |
Latest revision as of 18:11, 29 July 2015
Short description: | p@chr3:170415995..170416015, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170415995..170416015, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 8.56e-31 | 4 |
fibroblast of the aortic adventitia | 8.56e-31 | 4 |
vascular associated smooth muscle cell | 2.80e-10 | 32 |
smooth muscle cell of the brachiocephalic vasculature | 3.56e-08 | 2 |
central nervous system pericyte | 4.38e-08 | 2 |
smooth muscle cell of the internal thoracic artery | 9.19e-08 | 2 |
smooth muscle cell | 1.24e-07 | 43 |
smooth muscle myoblast | 1.24e-07 | 43 |
mesothelial cell | 7.05e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
artery wall | 8.56e-31 | 4 |
tunica adventitia of artery | 8.56e-31 | 4 |
adventitia | 8.56e-31 | 4 |
tunica adventitia of blood vessel | 8.56e-31 | 4 |
aorta tunica adventitia | 8.56e-31 | 4 |
aorta wall | 8.56e-31 | 4 |
systemic artery | 6.27e-25 | 33 |
systemic arterial system | 6.27e-25 | 33 |
artery | 1.90e-19 | 42 |
arterial blood vessel | 1.90e-19 | 42 |
arterial system | 1.90e-19 | 42 |
blood vessel layer | 6.60e-18 | 7 |
aorta | 8.15e-16 | 21 |
aortic system | 8.15e-16 | 21 |
epithelial tube open at both ends | 1.22e-13 | 59 |
blood vessel | 1.22e-13 | 59 |
blood vasculature | 1.22e-13 | 59 |
vascular cord | 1.22e-13 | 59 |
vessel | 9.81e-12 | 68 |
vasculature | 3.94e-10 | 78 |
vascular system | 3.94e-10 | 78 |
splanchnic layer of lateral plate mesoderm | 1.79e-09 | 83 |
brachiocephalic artery | 3.56e-08 | 2 |
brachiocephalic vasculature | 3.56e-08 | 2 |
meninx | 8.60e-08 | 2 |
membrane organ | 8.60e-08 | 2 |
meningeal cluster | 8.60e-08 | 2 |
internal thoracic artery | 9.19e-08 | 2 |
cardiovascular system | 5.11e-07 | 109 |
circulatory system | 8.29e-07 | 112 |