FFCP PHASE1:Hg19::chr3:165636566..165636608,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:165636566..165636608,+ | |||
|description=CAGE_peak_at_chr3:165636566..165636608,+ | |||
|id=chr3:165636566..165636608,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.65e-26!5;CL:0000039!5.06e-18!7;CL:0000586!5.06e-18!7;CL:0002541!3.48e-15!3;CL:0000054!3.88e-11!2;CL:0000137!3.88e-11!2;CL:0000092!3.88e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.70e-45;5!CL:0002321;5.49e-15;15!CL:0000039;4.20e-12;7!CL:0000586;4.20e-12;7!CL:0000148;8.05e-09;10!CL:0000540;5.10e-07;6!CL:0000404;5.10e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.75e-45,5;CL:0000039,4.13e-12,7;CL:0000586,4.13e-12,7;CL:0000148,7.84e-09,10;CL:0000541,7.84e-09,10;CL:0000540,5.42e-07,6;CL:0000031,5.42e-07,6;CL:0000404,5.42e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;5.10e-07;6 | |||
|ontology_enrichment_disease=DOID:200!3.88e-11!2;DOID:4305!3.88e-11!2;DOID:1036!5.51e-11!8;DOID:3095!8.13e-08!22;DOID:2994!8.13e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:1036;7.90e-19;8!DOID:1799;1.37e-10;1!DOID:10165;1.37e-10;1!DOID:1798;1.37e-10;1!DOID:0060085;2.08e-10;1!DOID:3165;2.08e-10;1!DOID:0060121;2.08e-10;1!DOID:2438;2.08e-10;1!DOID:4418;2.08e-10;1!DOID:3095;9.25e-07;22!DOID:2994;9.25e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.05e-19,8;DOID:1799,1.57e-10,1;DOID:10165,1.57e-10,1;DOID:1798,1.57e-10,1;DOID:0060085,2.08e-10,1;DOID:3165,2.08e-10,1;DOID:0060121,2.08e-10,1;DOID:2438,2.08e-10,1;DOID:4418,2.08e-10,1;DOID:3095,9.54e-07,22;DOID:2994,9.54e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.42e-15!8;UBERON:0000476!3.48e-15!3;UBERON:0000920!3.48e-15!3;UBERON:0003124!2.61e-11!7;UBERON:0003135!4.23e-11!11;UBERON:0005631!1.85e-08!14;UBERON:0000158!1.85e-08!14;UBERON:0000991!5.70e-08!21;UBERON:0009196!5.70e-08!21;UBERON:0009117!5.70e-08!21;UBERON:0005564!5.70e-08!21;UBERON:0004176!1.40e-07!22 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31750041646231,2.25300606146525,3.36962434321603,4.35376431064556,4.79409616663694,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683652335082007,0,4.8469127981277,1.62971057883012,0.31900115973192,0.183195186803725,1.5991043280559,0,0,0,5.63989151542952,5.68581349521445,6.20939871810618,2.65655225813859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24829966404928,3.37814839895082,0,0,3.84762337207362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20063098555574,5.40072439437941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,4.19050711170276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782988022584546,0,0,0,0,0,0,0,0,0,0,0,6.94429080406698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18105053337742,0.509944148709909,0.534434810531121,0,2.005660314339,0.303114792872958,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:165636566..165636608,+ | |||
}} |
Latest revision as of 17:57, 29 July 2015
Short description: | p@chr3:165636566..165636608, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:165636566..165636608, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.75e-45 | 5 |
germ line cell | 4.13e-12 | 7 |
germ cell | 4.13e-12 | 7 |
melanocyte | 7.84e-09 | 10 |
melanoblast | 7.84e-09 | 10 |
neuron | 5.42e-07 | 6 |
neuroblast | 5.42e-07 | 6 |
electrically signaling cell | 5.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.05e-19 | 8 |
islet cell tumor | 1.57e-10 | 1 |
endocrine pancreas cancer | 1.57e-10 | 1 |
pancreatic endocrine carcinoma | 1.57e-10 | 1 |
organ system benign neoplasm | 2.08e-10 | 1 |
skin benign neoplasm | 2.08e-10 | 1 |
integumentary system benign neoplasm | 2.08e-10 | 1 |
dermis tumor | 2.08e-10 | 1 |
cutaneous fibrous histiocytoma | 2.08e-10 | 1 |
germ cell and embryonal cancer | 9.54e-07 | 22 |
germ cell cancer | 9.54e-07 | 22 |