FFCP PHASE1:Hg19::chr3:16563124..16563137,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:16563124..16563137,+ | |||
|coexpression_cluster_id=C1849 | |coexpression_cluster_id=C1849 | ||
|description=CAGE_peak_at_chr3:16563124..16563137,+ | |description=CAGE_peak_at_chr3:16563124..16563137,+ | ||
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|ontology_enrichment_celltype=CL:0000080!1.41e-25!6;CL:0000946!1.70e-17!1;CL:0000786!1.70e-17!1;CL:0000980!1.70e-17!1;CL:0000838!3.14e-15!52;CL:0000542!6.17e-15!53;CL:0000051!6.17e-15!53;CL:0000945!3.12e-11!24;CL:0000826!3.12e-11!24;CL:0000988!4.41e-10!182;CL:0000785!2.02e-09!2;CL:0000955!2.02e-09!2;CL:0000818!2.02e-09!2;CL:0000954!2.02e-09!2;CL:0000816!2.02e-09!2;CL:0002087!3.03e-08!119;CL:0002031!6.88e-08!124;CL:0000738!6.44e-07!140 | |ontology_enrichment_celltype=CL:0000080!1.41e-25!6;CL:0000946!1.70e-17!1;CL:0000786!1.70e-17!1;CL:0000980!1.70e-17!1;CL:0000838!3.14e-15!52;CL:0000542!6.17e-15!53;CL:0000051!6.17e-15!53;CL:0000945!3.12e-11!24;CL:0000826!3.12e-11!24;CL:0000988!4.41e-10!182;CL:0000785!2.02e-09!2;CL:0000955!2.02e-09!2;CL:0000818!2.02e-09!2;CL:0000954!2.02e-09!2;CL:0000816!2.02e-09!2;CL:0002087!3.03e-08!119;CL:0002031!6.88e-08!124;CL:0000738!6.44e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.01e-12;25 | |ontology_enrichment_celltype_v019=CL:0000084;1.01e-12;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.01e-12,25;CL:0000827,1.01e-12,25;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060060!3.16e-18!1;DOID:0060061!3.16e-18!1;DOID:8691!3.16e-18!1;DOID:0060058!1.02e-07!10 | |ontology_enrichment_disease=DOID:0060060!3.16e-18!1;DOID:0060061!3.16e-18!1;DOID:8691!3.16e-18!1;DOID:0060058!1.02e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.58e-34;1!DOID:0060061;2.58e-34;1!DOID:8691;2.58e-34;1!DOID:0060058;2.49e-14;10 | |ontology_enrichment_disease_v019=DOID:0060060;2.58e-34;1!DOID:0060061;2.58e-34;1!DOID:8691;2.58e-34;1!DOID:0060058;2.49e-14;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.58e-34,1;DOID:0060061,2.58e-34,1;DOID:8691,2.58e-34,1;DOID:0060058,2.49e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0002331!1.23e-15!10;UBERON:0000358!1.23e-15!10;UBERON:0000307!1.23e-15!10;UBERON:0000091!1.23e-15!10;UBERON:0000087!1.23e-15!10;UBERON:0007806!1.23e-15!10;UBERON:0008780!1.23e-15!10;UBERON:0005728!1.23e-15!10;UBERON:0000178!1.23e-10!15;UBERON:0000179!1.23e-10!15;UBERON:0000463!1.23e-10!15;UBERON:0000478!7.46e-07!24 | |ontology_enrichment_uberon=UBERON:0002331!1.23e-15!10;UBERON:0000358!1.23e-15!10;UBERON:0000307!1.23e-15!10;UBERON:0000091!1.23e-15!10;UBERON:0000087!1.23e-15!10;UBERON:0007806!1.23e-15!10;UBERON:0008780!1.23e-15!10;UBERON:0005728!1.23e-15!10;UBERON:0000178!1.23e-10!15;UBERON:0000179!1.23e-10!15;UBERON:0000463!1.23e-10!15;UBERON:0000478!7.46e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.14e-30;10!UBERON:0000178;2.19e-20;15!UBERON:0000179;2.19e-20;15!UBERON:0000463;2.19e-20;15!UBERON:0000478;4.65e-13;24!UBERON:0002390;4.48e-10;32 | |ontology_enrichment_uberon_v019=UBERON:0002331;4.14e-30;10!UBERON:0000178;2.19e-20;15!UBERON:0000179;2.19e-20;15!UBERON:0000463;2.19e-20;15!UBERON:0000478;4.65e-13;24!UBERON:0002390;4.48e-10;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.14e-30,10;UBERON:0000358,4.14e-30,10;UBERON:0000307,4.14e-30,10;UBERON:0000091,4.14e-30,10;UBERON:0000087,4.14e-30,10;UBERON:0007010,4.14e-30,10;UBERON:0007806,4.14e-30,10;UBERON:0008780,4.14e-30,10;UBERON:0005728,4.14e-30,10;UBERON:0000178,2.19e-20,15;UBERON:0000179,2.19e-20,15;UBERON:0000463,2.19e-20,15;UBERON:0000478,4.65e-13,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.656804715599566,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40499758556474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85477467284809,3.08909847366257,3.13265848516366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46908502274835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.656804715599566,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40499758556474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85477467284809,3.08909847366257,3.13265848516366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46908502274835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:16563124..16563137,+ | |short_description=p@chr3:16563124..16563137,+ | ||
}} | }} |
Latest revision as of 17:57, 29 July 2015
Short description: | p@chr3:16563124..16563137, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:16563124..16563137, + |
Coexpression cluster: | C1849_anaplastic_cord_hairy_mycosis_adult_myeloma_NK |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.01e-12 | 25 |
pro-T cell | 1.01e-12 | 25 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.14e-30 | 10 |
blastocyst | 4.14e-30 | 10 |
blastula | 4.14e-30 | 10 |
bilaminar disc | 4.14e-30 | 10 |
inner cell mass | 4.14e-30 | 10 |
cleaving embryo | 4.14e-30 | 10 |
connecting stalk | 4.14e-30 | 10 |
inner cell mass derived epiblast | 4.14e-30 | 10 |
extraembryonic mesoderm | 4.14e-30 | 10 |
blood | 2.19e-20 | 15 |
haemolymphatic fluid | 2.19e-20 | 15 |
organism substance | 2.19e-20 | 15 |
extraembryonic structure | 4.65e-13 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.58e-34 | 1 |
cutaneous T cell lymphoma | 2.58e-34 | 1 |
mycosis fungoides | 2.58e-34 | 1 |
lymphoma | 2.49e-14 | 10 |