FFCP PHASE1:Hg19::chr3:156809021..156809030,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:156809021..156809030,- | |||
|coexpression_cluster_id=C677 | |||
|description=CAGE_peak_at_chr3:156809021..156809030,- | |description=CAGE_peak_at_chr3:156809021..156809030,- | ||
|id=chr3:156809021..156809030,- | |id=chr3:156809021..156809030,- | ||
|ontology_enrichment_celltype=CL:0002057!8.42e-46!42;CL:0000860!1.78e-42!45;CL:0000766!3.65e-42!76;CL:0000557!1.63e-41!71;CL:0000738!3.06e-36!140;CL:0000763!6.09e-35!112;CL:0000049!6.09e-35!112;CL:0000839!8.13e-35!70;CL:0002009!1.88e-34!65;CL:0002194!1.18e-28!63;CL:0000576!1.18e-28!63;CL:0000040!1.18e-28!63;CL:0000559!1.18e-28!63;CL:0000037!1.90e-28!172;CL:0000566!1.90e-28!172;CL:0002031!2.64e-28!124;CL:0002032!8.36e-28!165;CL:0000837!8.36e-28!165;CL:0000988!1.44e-26!182;CL:0002087!1.62e-20!119;CL:0000767!5.70e-19!3;CL:0001014!3.70e-13!2;CL:0001016!3.70e-13!2;CL:0000453!3.94e-11!5;CL:0002274!6.58e-11!5;CL:0000457!6.58e-11!5;CL:0002191!6.58e-11!5;CL:0000097!6.58e-11!5;CL:0000831!6.58e-11!5;CL:0002028!6.58e-11!5;CL:0000134!1.45e-10!358;CL:0002320!3.03e-10!365;CL:0000219!4.11e-09!390;CL:0000048!9.35e-08!430;CL:0000723!1.46e-07!436;CL:0000094!2.12e-07!8;CL:0000034!2.59e-07!444 | |ontology_enrichment_celltype=CL:0002057!8.42e-46!42;CL:0000860!1.78e-42!45;CL:0000766!3.65e-42!76;CL:0000557!1.63e-41!71;CL:0000738!3.06e-36!140;CL:0000763!6.09e-35!112;CL:0000049!6.09e-35!112;CL:0000839!8.13e-35!70;CL:0002009!1.88e-34!65;CL:0002194!1.18e-28!63;CL:0000576!1.18e-28!63;CL:0000040!1.18e-28!63;CL:0000559!1.18e-28!63;CL:0000037!1.90e-28!172;CL:0000566!1.90e-28!172;CL:0002031!2.64e-28!124;CL:0002032!8.36e-28!165;CL:0000837!8.36e-28!165;CL:0000988!1.44e-26!182;CL:0002087!1.62e-20!119;CL:0000767!5.70e-19!3;CL:0001014!3.70e-13!2;CL:0001016!3.70e-13!2;CL:0000453!3.94e-11!5;CL:0002274!6.58e-11!5;CL:0000457!6.58e-11!5;CL:0002191!6.58e-11!5;CL:0000097!6.58e-11!5;CL:0000831!6.58e-11!5;CL:0002028!6.58e-11!5;CL:0000134!1.45e-10!358;CL:0002320!3.03e-10!365;CL:0000219!4.11e-09!390;CL:0000048!9.35e-08!430;CL:0000723!1.46e-07!436;CL:0000094!2.12e-07!8;CL:0000034!2.59e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000767;1.35e-38;3!CL:0001014;1.43e-15;2!CL:0001016;1.43e-15;2!CL:0000094;3.40e-15;8!CL:0000860;2.85e-14;33!CL:0002057;2.85e-14;33!CL:0000081;2.48e-11;11!CL:0000473;1.79e-08;39!CL:0000234;1.79e-08;39!CL:0000576;5.09e-08;48!CL:0000453;5.23e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.23e-38,3;CL:0001014,1.54e-15,2;CL:0001016,1.54e-15,2;CL:0000094,3.29e-15,8;CL:0000766,3.45e-14,72;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002009,9.77e-12,61;CL:0000081,2.42e-11,11;CL:0000860,2.98e-11,42;CL:0002057,2.98e-11,42;CL:0000557,9.93e-11,67;CL:0000738,2.51e-10,136;CL:0000473,6.61e-10,48;CL:0000234,6.61e-10,48;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0002194,5.17e-08,59;CL:0000576,5.17e-08,59;CL:0000040,5.17e-08,59;CL:0000559,5.17e-08,59;CL:0000988,5.65e-08,177;CL:0000839,3.22e-07,66;CL:0000453,5.38e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.24e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.40e-36!80;UBERON:0001474!1.71e-33!86;UBERON:0002390!4.70e-30!102;UBERON:0003061!4.70e-30!102;UBERON:0004765!7.89e-28!101;UBERON:0001434!7.89e-28!101;UBERON:0002193!6.17e-27!112;UBERON:0002405!7.30e-24!115;UBERON:0002204!6.47e-15!167;UBERON:0003081!1.56e-11!216;UBERON:0002384!8.32e-10!375;UBERON:0001154!5.78e-07!1;UBERON:0001153!5.78e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.64e-09,76;UBERON:0001474,7.64e-09,82;UBERON:0004765,4.35e-08,90;UBERON:0002405,7.74e-08,93;UBERON:0002390,1.87e-07,98;UBERON:0003061,1.87e-07,98;UBERON:0001434,2.61e-07,100;UBERON:0002193,8.66e-07,108 | |||
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|short_description=p@chr3:156809021..156809030,- | |short_description=p@chr3:156809021..156809030,- | ||
}} | }} |
Latest revision as of 17:30, 29 July 2015
Short description: | p@chr3:156809021..156809030, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:156809021..156809030, - |
Coexpression cluster: | C677_Basophils_CD14_Eosinophils_Neutrophils_CD34_Peripheral_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 1.23e-38 | 3 |
CD1a-positive Langerhans cell | 1.54e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.54e-15 | 2 |
granulocyte | 3.29e-15 | 8 |
myeloid leukocyte | 3.45e-14 | 72 |
myeloid cell | 6.23e-13 | 108 |
common myeloid progenitor | 6.23e-13 | 108 |
macrophage dendritic cell progenitor | 9.77e-12 | 61 |
blood cell | 2.42e-11 | 11 |
classical monocyte | 2.98e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.98e-11 | 42 |
granulocyte monocyte progenitor cell | 9.93e-11 | 67 |
leukocyte | 2.51e-10 | 136 |
defensive cell | 6.61e-10 | 48 |
phagocyte | 6.61e-10 | 48 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
monopoietic cell | 5.17e-08 | 59 |
monocyte | 5.17e-08 | 59 |
monoblast | 5.17e-08 | 59 |
promonocyte | 5.17e-08 | 59 |
hematopoietic cell | 5.65e-08 | 177 |
myeloid lineage restricted progenitor cell | 3.22e-07 | 66 |
Langerhans cell | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.64e-09 | 76 |
bone element | 7.64e-09 | 82 |
skeletal element | 4.35e-08 | 90 |
immune system | 7.74e-08 | 93 |
hematopoietic system | 1.87e-07 | 98 |
blood island | 1.87e-07 | 98 |
skeletal system | 2.61e-07 | 100 |
hemolymphoid system | 8.66e-07 | 108 |