FFCP PHASE1:Hg19::chr3:156258392..156258395,-: Difference between revisions
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|id=chr3:156258392..156258395,-
|short_description=p@chr3:156258392..156258395,-
|description=CAGE_peak_at_chr3:156258392..156258395,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:156258392..156258395,- | |||
|description=CAGE_peak_at_chr3:156258392..156258395,- | |||
|id=chr3:156258392..156258395,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002557;3.34e-66;1!CL:0002593;3.61e-34;2!CL:0000214;3.66e-23;3!CL:0002595;1.40e-14;5!CL:0000153;1.16e-08;9!CL:0000447;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002557,2.39e-66,1;CL:0002593,3.61e-34,2;CL:0000214,4.09e-23,3;CL:0002595,1.40e-14,5;CL:0000153,1.21e-08,9;CL:0000447,1.21e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.61e-34;2!UBERON:0000078;5.96e-34;2!UBERON:0002012;5.96e-34;2!UBERON:0008886;5.96e-34;2!UBERON:0006915;3.66e-23;3!UBERON:0007616;3.66e-23;3!UBERON:0002217;3.66e-23;3!UBERON:0002018;3.66e-23;3!UBERON:0003834;1.40e-14;5!UBERON:0001533;1.40e-14;5!UBERON:0003513;8.16e-11;7!UBERON:0004905;1.41e-09;8!UBERON:0000982;1.41e-09;8!UBERON:0004770;1.41e-09;8!UBERON:0004457;1.16e-08;9!UBERON:0000042;1.16e-08;9!UBERON:0010313;6.34e-08;10!UBERON:0000486;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.61e-34,2;UBERON:0000078,5.04e-34,2;UBERON:0007497,5.04e-34,2;UBERON:0003643,5.04e-34,2;UBERON:0003504,5.04e-34,2;UBERON:0003469,5.04e-34,2;UBERON:0003496,5.04e-34,2;UBERON:0002012,5.04e-34,2;UBERON:0008886,5.04e-34,2;UBERON:0007303,5.04e-34,2;UBERON:0002061,5.04e-34,2;UBERON:0005432,5.04e-34,2;UBERON:0004363,5.04e-34,2;UBERON:0004145,3.27e-23,3;UBERON:0006915,4.09e-23,3;UBERON:0007616,4.09e-23,3;UBERON:0002217,4.09e-23,3;UBERON:0002018,4.09e-23,3;UBERON:0003834,1.40e-14,5;UBERON:0001533,1.40e-14,5;UBERON:0003498,1.60e-14,5;UBERON:0005985,1.60e-14,5;UBERON:0010188,2.45e-12,6;UBERON:0002539,2.45e-12,6;UBERON:0003351,2.45e-12,6;UBERON:0008816,2.45e-12,6;UBERON:0003513,8.16e-11,7;UBERON:0004905,1.47e-09,8;UBERON:0000982,1.47e-09,8;UBERON:0004770,1.47e-09,8;UBERON:0000485,1.12e-08,9;UBERON:0010313,6.13e-08,10;UBERON:0002342,6.13e-08,10;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0005062,6.13e-08,10;UBERON:0001637,2.04e-07,42;UBERON:0003509,2.04e-07,42;UBERON:0004572,2.04e-07,42;UBERON:0006562,2.47e-07,11;UBERON:0009722,2.47e-07,11;UBERON:0007690,2.47e-07,11;UBERON:0004457,8.38e-07,12;UBERON:0000042,8.38e-07,12 | |||
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| ||
|short_description=p@chr3:156258392..156258395,- | |||
}} | }} |
Latest revision as of 17:26, 29 July 2015
Short description: | p@chr3:156258392..156258395, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:156258392..156258395, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of pulmonary artery | 2.39e-66 | 1 |
smooth muscle cell of the internal thoracic artery | 3.61e-34 | 2 |
synovial cell | 4.09e-23 | 3 |
smooth muscle cell of the subclavian artery | 1.40e-14 | 5 |
GAG secreting cell | 1.21e-08 | 9 |
carbohydrate secreting cell | 1.21e-08 | 9 |