FFCP PHASE1:Hg19::chr3:145838965..145839010,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:145838965..145839010,+ | |||
|coexpression_cluster_id=C1512 | |coexpression_cluster_id=C1512 | ||
|description=CAGE_peak_at_chr3:145838965..145839010,+ | |description=CAGE_peak_at_chr3:145838965..145839010,+ | ||
|id=chr3:145838965..145839010,+ | |id=chr3:145838965..145839010,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.10e-24!180;CL:0000359!3.94e-17!32;CL:0000680!9.86e-17!57;CL:0000056!9.86e-17!57;CL:0000355!9.86e-17!57;CL:0000187!2.05e-15!54;CL:0000222!9.43e-15!119;CL:0000192!1.40e-14!42;CL:0000514!1.40e-14!42;CL:0000220!3.01e-14!246;CL:0002321!3.75e-14!248;CL:0000183!7.02e-14!59;CL:0000393!2.83e-13!60;CL:0000211!2.83e-13!60;CL:0000057!4.35e-10!75;CL:0000548!7.14e-10!679;CL:0000004!7.14e-10!679;CL:0000255!7.14e-10!679;CL:0000012!2.68e-09!682 | |ontology_enrichment_celltype=CL:0000055!1.10e-24!180;CL:0000359!3.94e-17!32;CL:0000680!9.86e-17!57;CL:0000056!9.86e-17!57;CL:0000355!9.86e-17!57;CL:0000187!2.05e-15!54;CL:0000222!9.43e-15!119;CL:0000192!1.40e-14!42;CL:0000514!1.40e-14!42;CL:0000220!3.01e-14!246;CL:0002321!3.75e-14!248;CL:0000183!7.02e-14!59;CL:0000393!2.83e-13!60;CL:0000211!2.83e-13!60;CL:0000057!4.35e-10!75;CL:0000548!7.14e-10!679;CL:0000004!7.14e-10!679;CL:0000255!7.14e-10!679;CL:0000012!2.68e-09!682 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.86e-20;32!CL:0000192;2.96e-14;43!CL:0000187;5.13e-10;55!CL:0000134;2.96e-09;55!CL:0002539;9.38e-08;10!CL:0002494;1.51e-07;16!CL:0000723;1.98e-07;61!CL:0000393;2.38e-07;61!CL:0000211;2.38e-07;61!CL:0000048;3.12e-07;58!CL:0002334;8.32e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.22e-22,32;CL:0000680,7.53e-20,58;CL:0000056,7.53e-20,58;CL:0000355,7.53e-20,58;CL:0000192,5.52e-19,43;CL:0000514,5.52e-19,43;CL:0000187,5.02e-18,55;CL:0000222,6.71e-15,121;CL:0000393,8.01e-15,61;CL:0000211,8.01e-15,61;CL:0000057,4.94e-11,76;CL:0000048,1.69e-10,427;CL:0000723,1.76e-10,433;CL:0000034,1.42e-09,441;CL:0002321,6.50e-09,250;CL:0002539,1.04e-07,10;CL:0002494,1.63e-07,16;CL:0002334,6.83e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.96e-14;43!CL:0000355;7.88e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!4.36e-08!14;DOID:193!6.83e-07!29 | |ontology_enrichment_disease=DOID:2394!4.36e-08!14;DOID:193!6.83e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.79e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.59e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.16e-17!83;UBERON:0002329!4.16e-17!83;UBERON:0003077!4.16e-17!83;UBERON:0003059!4.16e-17!83;UBERON:0007282!4.16e-17!83;UBERON:0009618!4.16e-17!83;UBERON:0007285!4.16e-17!83;UBERON:0000486!3.46e-16!82;UBERON:0000490!3.88e-16!138;UBERON:0002049!1.45e-15!79;UBERON:0007798!1.45e-15!79;UBERON:0001134!2.04e-15!61;UBERON:0002036!2.04e-15!61;UBERON:0003082!2.04e-15!61;UBERON:0001637!2.73e-15!42;UBERON:0003509!2.73e-15!42;UBERON:0004572!2.73e-15!42;UBERON:0002385!3.98e-15!63;UBERON:0001015!3.98e-15!63;UBERON:0000383!3.98e-15!63;UBERON:0005256!8.67e-15!143;UBERON:0004290!1.16e-14!70;UBERON:0001981!2.46e-14!60;UBERON:0007500!2.46e-14!60;UBERON:0004537!2.46e-14!60;UBERON:0006965!2.46e-14!60;UBERON:0004573!1.91e-13!33;UBERON:0004571!1.91e-13!33;UBERON:0000055!2.16e-13!69;UBERON:0004872!4.46e-13!84;UBERON:0003914!3.27e-12!118;UBERON:0002100!9.38e-12!216;UBERON:0004535!1.64e-11!110;UBERON:0001009!1.79e-11!113;UBERON:0003104!6.93e-09!238;UBERON:0009142!6.93e-09!238;UBERON:0000475!2.46e-07!365;UBERON:0000477!3.32e-07!286;UBERON:0000947!3.96e-07!21;UBERON:0010191!3.96e-07!21;UBERON:0000483!4.94e-07!309;UBERON:0001135!7.03e-07!15 | |ontology_enrichment_uberon=UBERON:0000914!4.16e-17!83;UBERON:0002329!4.16e-17!83;UBERON:0003077!4.16e-17!83;UBERON:0003059!4.16e-17!83;UBERON:0007282!4.16e-17!83;UBERON:0009618!4.16e-17!83;UBERON:0007285!4.16e-17!83;UBERON:0000486!3.46e-16!82;UBERON:0000490!3.88e-16!138;UBERON:0002049!1.45e-15!79;UBERON:0007798!1.45e-15!79;UBERON:0001134!2.04e-15!61;UBERON:0002036!2.04e-15!61;UBERON:0003082!2.04e-15!61;UBERON:0001637!2.73e-15!42;UBERON:0003509!2.73e-15!42;UBERON:0004572!2.73e-15!42;UBERON:0002385!3.98e-15!63;UBERON:0001015!3.98e-15!63;UBERON:0000383!3.98e-15!63;UBERON:0005256!8.67e-15!143;UBERON:0004290!1.16e-14!70;UBERON:0001981!2.46e-14!60;UBERON:0007500!2.46e-14!60;UBERON:0004537!2.46e-14!60;UBERON:0006965!2.46e-14!60;UBERON:0004573!1.91e-13!33;UBERON:0004571!1.91e-13!33;UBERON:0000055!2.16e-13!69;UBERON:0004872!4.46e-13!84;UBERON:0003914!3.27e-12!118;UBERON:0002100!9.38e-12!216;UBERON:0004535!1.64e-11!110;UBERON:0001009!1.79e-11!113;UBERON:0003104!6.93e-09!238;UBERON:0009142!6.93e-09!238;UBERON:0000475!2.46e-07!365;UBERON:0000477!3.32e-07!286;UBERON:0000947!3.96e-07!21;UBERON:0010191!3.96e-07!21;UBERON:0000483!4.94e-07!309;UBERON:0001135!7.03e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.38e-14;33!UBERON:0004571;1.38e-14;33!UBERON:0001637;6.84e-14;42!UBERON:0003509;6.84e-14;42!UBERON:0004572;6.84e-14;42!UBERON:0007500;2.12e-09;56!UBERON:0001981;2.12e-09;56!UBERON:0004537;2.12e-09;56!UBERON:0004237;9.38e-08;10!UBERON:0004695;9.38e-08;10!UBERON:0002111;9.38e-08;10!UBERON:0004178;9.38e-08;10!UBERON:0000055;1.73e-07;65!UBERON:0000947;1.85e-07;21!UBERON:0010191;1.85e-07;21!UBERON:0001135;2.07e-07;15!UBERON:0002385;5.15e-07;31!UBERON:0001015;5.15e-07;31!UBERON:0000383;5.15e-07;31 | |||
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| ||
|short_description=p@chr3:145838965..145839010,+ | |short_description=p@chr3:145838965..145839010,+ | ||
}} | }} |
Latest revision as of 16:37, 29 July 2015
Short description: | p@chr3:145838965..145839010, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:145838965..145839010, + |
Coexpression cluster: | C1512_Smooth_hepatic_mesenchymal_Mallassezderived_Small_Gingival_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.22e-22 | 32 |
muscle precursor cell | 7.53e-20 | 58 |
myoblast | 7.53e-20 | 58 |
multi-potent skeletal muscle stem cell | 7.53e-20 | 58 |
smooth muscle cell | 5.52e-19 | 43 |
smooth muscle myoblast | 5.52e-19 | 43 |
muscle cell | 5.02e-18 | 55 |
mesodermal cell | 6.71e-15 | 121 |
electrically responsive cell | 8.01e-15 | 61 |
electrically active cell | 8.01e-15 | 61 |
fibroblast | 4.94e-11 | 76 |
multi fate stem cell | 1.69e-10 | 427 |
somatic stem cell | 1.76e-10 | 433 |
stem cell | 1.42e-09 | 441 |
embryonic cell | 6.50e-09 | 250 |
aortic smooth muscle cell | 1.04e-07 | 10 |
cardiocyte | 1.63e-07 | 16 |
preadipocyte | 6.83e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.59e-11 | 14 |