FFCP PHASE1:Hg19::chr3:141118850..141118854,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:141118850..141118854,+ to FFCP PHASE1:Hg19::chr3:141118850..141118854,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:141118850..141118854,+ | |||
|description=CAGE_peak_at_chr3:141118850..141118854,+ | |||
|id=chr3:141118850..141118854,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000306;2.12e-07;4!CL:0002547;2.12e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.03e-07,4;CL:0002547,3.03e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.11e-20;3 | |||
|ontology_enrichment_disease=DOID:0050687!1.68e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4960;8.20e-08;1!DOID:0070004;8.20e-08;1!DOID:3112;8.20e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,9.10e-08,1;DOID:4960,1.99e-07,1;DOID:0070004,1.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!2.03e-13!34;UBERON:0003528!2.03e-13!34;UBERON:0001893!6.31e-13!34;UBERON:0002791!1.62e-12!33;UBERON:0001049!1.69e-12!57;UBERON:0005068!1.69e-12!57;UBERON:0006241!1.69e-12!57;UBERON:0007135!1.69e-12!57;UBERON:0001869!5.35e-12!32;UBERON:0002616!1.06e-11!59;UBERON:0000955!2.85e-11!69;UBERON:0006238!2.85e-11!69;UBERON:0002780!3.20e-10!41;UBERON:0001890!3.20e-10!41;UBERON:0006240!3.20e-10!41;UBERON:0003080!9.12e-10!42;UBERON:0003075!2.51e-09!86;UBERON:0007284!2.51e-09!86;UBERON:0002346!2.57e-09!90;UBERON:0001017!2.80e-09!82;UBERON:0000956!4.56e-09!25;UBERON:0000203!4.56e-09!25;UBERON:0002619!6.81e-09!22;UBERON:0005743!1.10e-08!86;UBERON:0000073!1.12e-08!94;UBERON:0001016!1.12e-08!94;UBERON:0007023!2.91e-08!115;UBERON:0001950!1.17e-07!20;UBERON:0000483!1.27e-07!309;UBERON:0000025!1.33e-07!194;UBERON:0000481!1.53e-07!347;UBERON:0000477!1.76e-07!286;UBERON:0003056!2.43e-07!61;UBERON:0000119!2.72e-07!312;UBERON:0000033!7.63e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.78e-10;6!UBERON:0005795;8.20e-08;1!UBERON:0002134;8.20e-08;1!UBERON:0001282;8.20e-08;1!UBERON:0009842;8.20e-08;1!UBERON:0003704;8.20e-08;1!UBERON:0005208;8.20e-08;1!UBERON:0004145;8.20e-08;1!UBERON:0005946;8.20e-08;1!UBERON:0001171;8.20e-08;1!UBERON:0001172;8.20e-08;1!UBERON:0005965;8.20e-08;1!UBERON:0002078;8.20e-08;1!UBERON:0004797;2.12e-07;4!UBERON:0000415;2.12e-07;4!UBERON:0007240;2.12e-07;4!UBERON:0005742;2.12e-07;4!UBERON:0005734;2.12e-07;4!UBERON:0004664;2.12e-07;4!UBERON:0004663;2.12e-07;4!UBERON:0002680;5.25e-07;9!UBERON:0001895;5.25e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.27e-10,6;UBERON:0006215,2.27e-10,6;UBERON:0004797,8.61e-09,7;UBERON:0001282,4.07e-08,1;UBERON:0009842,4.07e-08,1;UBERON:0003704,4.07e-08,1;UBERON:0001171,4.07e-08,1;UBERON:0001172,4.07e-08,1;UBERON:0002134,6.52e-08,1;UBERON:0005208,6.52e-08,1;UBERON:0005946,6.52e-08,1;UBERON:0005965,6.52e-08,1;UBERON:0002078,6.52e-08,1;UBERON:0000415,3.03e-07,4;UBERON:0007240,3.03e-07,4;UBERON:0005742,3.03e-07,4;UBERON:0005734,3.03e-07,4;UBERON:0004664,3.03e-07,4;UBERON:0004663,3.03e-07,4;UBERON:0002680,4.60e-07,9;UBERON:0001895,4.60e-07,9;UBERON:0010092,4.60e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0.328402357799783,0.314843125254717,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.649094787309367,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0,1.32409180813219,0,1.06400514659507,0,0,0,0,0.134710672069688,0.980771418680752,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0,1.22492502752936,0.491337269247072,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0,0,0.38474715694639,0,0,0,1.47008711385542,1.26755034821831,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0,0,0.307007349452259,0.137836572484531,0.537101224341368,0.435050081742686,0.255679882248303,0,0,0,1.65896526242959,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0.994147647766298,1.26602474769461,1.33570446027487,0.329607748453519,5.91151142758382,0.796991953004279,0,0,0.306806047506464,0,0,0.629078458031288,0.895105873378046,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0.482385754501632,1.52581736317083,1.43753037910592,1.18219047581419,0.219385397153973,0.10893846351899,0,0.153900517007594,1.70913083770502,0,0,0,0,0.183195186803725,0,0,0.31396051279005,0,0.225595660617181,0,0.167821586975843,0,0.158936578980379,0,0,0.141353071433941,0,0,0.176915129006678,1.83309043480088,4.15129580152871,1.85345908419754,1.98401704060365,0.202203398942031,0,0,0,0.19566461893209,1.45668227720456,0,0,0.61214552326098,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0.17472666824203,0.343972064943233,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0,0.677942222341597,1.37041924646751,0.19871461170299,0.126621591911757,0.391102765469606,0.160317640503067,0,0,0,0,0,1.1524383839052,0.248505071130865,0.707082103850386,0,0.209205692624666,0.101998217636322,0.577901179803038,0.600420288709789,0.547621515567972,0,0,0,0,0.458320848023367,1.43574604915363,0,0,0.223171457441873,0.0671834724867263,0.720599767084807,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0.340776043570843,0.113312091520126,0,0,0.387848869084652,0.52893040697076,0.342173675768659,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.3755727921195,0,0.221858103073705,0.0620964029413835,0,0,0.606596470166591,0.570930667089935,0.235265819698172,0.468334905806882,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0,0.295710299979268,0.318593534327405,0.449803112163605,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.911579868532147,0.829550616910385,0.194860308839388,0,0,0,0.491545817507439,0.211312123358627,0,0,1.03328987796489,0.567515953566836,0,0,0,0.127894371303652,0.323474434190045,0,0,0,0,0.123935764259002,0,0,0.630893960010027,0,0.352675943690684,0,0.256916900385838,0,1.43670473151436,0.615349092722265,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0.462102664601353,0.381382095467167,0,0,0,0,0,0.261906694481422,1.31017534008077,0.887136517302272,0.202612753855184,0.781078098613847,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0.175871244359621,0.255524855279191,0,0,0,0,0.266107110487916,0.115233987555779,0.685952037749674,0.135939465953663,0.263091094251396,0.236387681767936,0,0.156986185701028,0.471346769748006,0.840816489941367,0,0.215927591218621,0.47775168788705,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0.236664001461131,0.170426809518315,0.423387050190929,1.14553434272025,0,0,0.111855431797792,0.196300467230486,0,0.647428837187895,0,0,0,0,0,0,0,0,0.150962843566674,0.231522474323834,2.18559560503957,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0,0.169927114687817,0,0,0.199882311849858,0,0,0.320965466756673,0,0,0.286679166302903,0,0.135982980381829,0.436350690340377,1.0580536810308,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0.267964130156178,0,0.413731983447581,0,0,0,0,0,0,0.404234377916439,0,0,0,0.143444410785353,0,0,0.320182037633146,0,0,0,0,1.22068853494722,0.665756774185513,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0.328402357799783,0.314843125254717,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.649094787309367,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0,1.32409180813219,0,1.06400514659507,0,0,0,0,0.134710672069688,0.980771418680752,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0,1.22492502752936,0.491337269247072,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0,0,0.38474715694639,0,0,0,1.47008711385542,1.26755034821831,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0,0,0.307007349452259,0.137836572484531,0.537101224341368,0.435050081742686,0.255679882248303,0,0,0,1.65896526242959,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0.994147647766298,1.26602474769461,1.33570446027487,0.329607748453519,5.91151142758382,0.796991953004279,0,0,0.306806047506464,0,0,0.629078458031288,0.895105873378046,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0.482385754501632,1.52581736317083,1.43753037910592,1.18219047581419,0.219385397153973,0.10893846351899,0,0.153900517007594,1.70913083770502,0,0,0,0,0.183195186803725,0,0,0.31396051279005,0,0.225595660617181,0,0.167821586975843,0,0.158936578980379,0,0,0.141353071433941,0,0,0.176915129006678,1.83309043480088,4.15129580152871,1.85345908419754,1.98401704060365,0.202203398942031,0,0,0,0.19566461893209,1.45668227720456,0,0,0.61214552326098,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0.17472666824203,0.343972064943233,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0,0.677942222341597,1.37041924646751,0.19871461170299,0.126621591911757,0.391102765469606,0.160317640503067,0,0,0,0,0,1.1524383839052,0.248505071130865,0.707082103850386,0,0.209205692624666,0.101998217636322,0.577901179803038,0.600420288709789,0.547621515567972,0,0,0,0,0.458320848023367,1.43574604915363,0,0,0.223171457441873,0.0671834724867263,0.720599767084807,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0.340776043570843,0.113312091520126,0,0,0.387848869084652,0.52893040697076,0.342173675768659,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.3755727921195,0,0.221858103073705,0.0620964029413835,0,0,0.606596470166591,0.570930667089935,0.235265819698172,0.468334905806882,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0,0.295710299979268,0.318593534327405,0.449803112163605,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.911579868532147,0.829550616910385,0.194860308839388,0,0,0,0.491545817507439,0.211312123358627,0,0,1.03328987796489,0.567515953566836,0,0,0,0.127894371303652,0.323474434190045,0,0,0,0,0.123935764259002,0,0,0.630893960010027,0,0.352675943690684,0,0.256916900385838,0,1.43670473151436,0.615349092722265,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0.462102664601353,0.381382095467167,0,0,0,0,0,0.261906694481422,1.31017534008077,0.887136517302272,0.202612753855184,0.781078098613847,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0.175871244359621,0.255524855279191,0,0,0,0,0.266107110487916,0.115233987555779,0.685952037749674,0.135939465953663,0.263091094251396,0.236387681767936,0,0.156986185701028,0.471346769748006,0.840816489941367,0,0.215927591218621,0.47775168788705,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0.236664001461131,0.170426809518315,0.423387050190929,1.14553434272025,0,0,0.111855431797792,0.196300467230486,0,0.647428837187895,0,0,0,0,0,0,0,0,0.150962843566674,0.231522474323834,2.18559560503957,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0,0.169927114687817,0,0,0.199882311849858,0,0,0.320965466756673,0,0,0.286679166302903,0,0.135982980381829,0.436350690340377,1.0580536810308,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0.267964130156178,0,0.413731983447581,0,0,0,0,0,0,0.404234377916439,0,0,0,0.143444410785353,0,0,0.320182037633146,0,0,0,0,1.22068853494722,0.665756774185513,0,0.641136984606466 | ||
|short_description=p@chr3:141118850..141118854,+ | |||
}} | }} |
Latest revision as of 16:25, 29 July 2015
Short description: | p@chr3:141118850..141118854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:141118850..141118854, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.03e-07 | 4 |
fibroblast of the aortic adventitia | 3.03e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.27e-10 | 6 |
rhombic lip | 2.27e-10 | 6 |
blood vessel layer | 8.61e-09 | 7 |
intralobular bile duct | 4.07e-08 | 1 |
acinus | 4.07e-08 | 1 |
intrahepatic bile duct | 4.07e-08 | 1 |
portal lobule | 4.07e-08 | 1 |
hepatic acinus | 4.07e-08 | 1 |
tricuspid valve | 6.52e-08 | 1 |
right atrium valve | 6.52e-08 | 1 |
outflow tract of atrium | 6.52e-08 | 1 |
outflow part of right atrium | 6.52e-08 | 1 |
right cardiac atrium | 6.52e-08 | 1 |
artery wall | 3.03e-07 | 4 |
tunica adventitia of artery | 3.03e-07 | 4 |
adventitia | 3.03e-07 | 4 |
tunica adventitia of blood vessel | 3.03e-07 | 4 |
aorta tunica adventitia | 3.03e-07 | 4 |
aorta wall | 3.03e-07 | 4 |
regional part of metencephalon | 4.60e-07 | 9 |
metencephalon | 4.60e-07 | 9 |
future metencephalon | 4.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 9.10e-08 | 1 |
bone marrow cancer | 1.99e-07 | 1 |
myeloma | 1.99e-07 | 1 |