FFCP PHASE1:Hg19::chr3:133144257..133144263,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:133144257..133144263,+ | |||
|coexpression_cluster_id=C1830 | |||
|description=CAGE_peak_at_chr3:133144257..133144263,+ | |description=CAGE_peak_at_chr3:133144257..133144263,+ | ||
|id=chr3:133144257..133144263,+ | |id=chr3:133144257..133144263,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.38e-25!24;CL:0000826!2.38e-25!24;CL:0000542!2.79e-23!53;CL:0000051!2.79e-23!53;CL:0000838!2.53e-22!52;CL:0000236!5.83e-15!14;CL:0002087!1.54e-11!119;CL:0000738!1.94e-10!140;CL:0000037!3.01e-09!172;CL:0000566!3.01e-09!172;CL:0000988!3.81e-09!182;CL:0002031!1.77e-08!124;CL:0002032!2.14e-07!165;CL:0000837!2.14e-07!165 | |ontology_enrichment_celltype=CL:0000945!2.38e-25!24;CL:0000826!2.38e-25!24;CL:0000542!2.79e-23!53;CL:0000051!2.79e-23!53;CL:0000838!2.53e-22!52;CL:0000236!5.83e-15!14;CL:0002087!1.54e-11!119;CL:0000738!1.94e-10!140;CL:0000037!3.01e-09!172;CL:0000566!3.01e-09!172;CL:0000988!3.81e-09!182;CL:0002031!1.77e-08!124;CL:0002032!2.14e-07!165;CL:0000837!2.14e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.51e-53;24!CL:0000542;1.46e-26;53!CL:0000236;1.59e-19;13!CL:0002087;2.77e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.32e-53,24;CL:0000826,5.32e-53,24;CL:0000542,5.87e-47,53;CL:0000051,5.87e-47,53;CL:0000838,5.13e-44,52;CL:0000236,6.78e-23,14;CL:0002087,2.29e-21,115;CL:0000738,1.69e-18,136;CL:0002031,1.76e-18,120;CL:0000988,3.25e-16,177;CL:0000037,3.49e-16,168;CL:0002032,6.75e-16,161;CL:0000837,6.75e-16,161;CL:0000785,4.15e-09,2;CL:0000955,4.15e-09,2;CL:0000818,4.15e-09,2;CL:0000954,4.15e-09,2;CL:0000816,4.15e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.46e-26;53!CL:0000954;3.24e-09;2 | |||
|ontology_enrichment_disease=DOID:162!1.19e-12!235;DOID:14566!3.14e-12!239;DOID:0060058!6.67e-09!10;DOID:0050686!1.88e-08!137 | |ontology_enrichment_disease=DOID:162!1.19e-12!235;DOID:14566!3.14e-12!239;DOID:0060058!6.67e-09!10;DOID:0050686!1.88e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.64e-19;10!DOID:1909;4.06e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.46e-19,10;DOID:2531,8.51e-11,51;DOID:0060083,8.51e-11,51;DOID:1909,4.89e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| 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| ||
|short_description=p@chr3:133144257..133144263,+ | |short_description=p@chr3:133144257..133144263,+ | ||
}} | }} | ||
Latest revision as of 15:57, 29 July 2015
| Short description: | p@chr3:133144257..133144263, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:133144257..133144263, + |
| Coexpression cluster: | C1830_CD19_xeroderma_b_lymphoma_hereditary_B_plasma |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte of B lineage | 5.32e-53 | 24 |
| pro-B cell | 5.32e-53 | 24 |
| lymphocyte | 5.87e-47 | 53 |
| common lymphoid progenitor | 5.87e-47 | 53 |
| lymphoid lineage restricted progenitor cell | 5.13e-44 | 52 |
| B cell | 6.78e-23 | 14 |
| nongranular leukocyte | 2.29e-21 | 115 |
| leukocyte | 1.69e-18 | 136 |
| hematopoietic lineage restricted progenitor cell | 1.76e-18 | 120 |
| hematopoietic cell | 3.25e-16 | 177 |
| hematopoietic stem cell | 3.49e-16 | 168 |
| hematopoietic oligopotent progenitor cell | 6.75e-16 | 161 |
| hematopoietic multipotent progenitor cell | 6.75e-16 | 161 |
| mature B cell | 4.15e-09 | 2 |
| pre-B-II cell | 4.15e-09 | 2 |
| transitional stage B cell | 4.15e-09 | 2 |
| small pre-B-II cell | 4.15e-09 | 2 |
| immature B cell | 4.15e-09 | 2 |
| Ontology term | p-value | n |
|---|---|---|
| lymphoma | 3.46e-19 | 10 |
| hematologic cancer | 8.51e-11 | 51 |
| immune system cancer | 8.51e-11 | 51 |
| melanoma | 4.89e-09 | 2 |