FFCP PHASE1:Hg19::chr3:123452992..123453006,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:123452992..123453006,- | |||
|coexpression_cluster_id=C4275 | |||
|description=CAGE_peak_at_chr3:123452992..123453006,- | |description=CAGE_peak_at_chr3:123452992..123453006,- | ||
|id=chr3:123452992..123453006,- | |id=chr3:123452992..123453006,- | ||
|ontology_enrichment_celltype=CL:0000055!1.31e-15!180;CL:0000057!4.11e-15!75;CL:0002620!1.56e-14!23;CL:0000548!7.24e-09!679;CL:0000004!7.24e-09!679;CL:0000255!7.24e-09!679;CL:0000012!1.19e-08!682;CL:0000144!1.17e-07!625;CL:0002556!6.55e-07!6 | |ontology_enrichment_celltype=CL:0000055!1.31e-15!180;CL:0000057!4.11e-15!75;CL:0002620!1.56e-14!23;CL:0000548!7.24e-09!679;CL:0000004!7.24e-09!679;CL:0000255!7.24e-09!679;CL:0000012!1.19e-08!682;CL:0000144!1.17e-07!625;CL:0002556!6.55e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000346;4.19e-11;3!CL:1000428;4.19e-11;3!CL:0002379;2.50e-09;1!CL:0002581;5.97e-09;1!CL:0002559;5.31e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.78e-11,3;CL:1000428,2.78e-11,3;CL:0002379,2.82e-09,1;CL:0002581,4.54e-09,1;CL:0002559,4.16e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.97e-07!5;DOID:450!4.97e-07!5;DOID:66!4.97e-07!5;DOID:423!4.97e-07!5;DOID:0080000!4.97e-07!5;DOID:11722!4.97e-07!5 | |ontology_enrichment_disease=DOID:17!4.97e-07!5;DOID:450!4.97e-07!5;DOID:66!4.97e-07!5;DOID:423!4.97e-07!5;DOID:0080000!4.97e-07!5;DOID:11722!4.97e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:3620;2.50e-09;1!DOID:3565;2.50e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.82e-09,1;DOID:3565,2.82e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.75e-13!95;UBERON:0002199!1.29e-10!45;UBERON:0002416!1.29e-10!45;UBERON:0002097!1.43e-10!40;UBERON:0000475!8.17e-09!365;UBERON:0005256!5.11e-08!143;UBERON:0007625!1.33e-07!11;UBERON:0001758!6.55e-07!6;UBERON:0003672!6.55e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;4.19e-11;3!UBERON:0001992;4.19e-11;3!UBERON:0002073;5.31e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.78e-11,3;UBERON:0001992,2.78e-11,3;UBERON:0002073,4.16e-07,5;UBERON:0005086,4.16e-07,5 | |||
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| ||
|short_description=p@chr3:123452992..123453006,- | |short_description=p@chr3:123452992..123453006,- | ||
}} | }} |
Latest revision as of 15:10, 29 July 2015
Short description: | p@chr3:123452992..123453006, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:123452992..123453006, - |
Coexpression cluster: | C4275_oral_transitionalcell_tridermal_mesothelioma_Renal_Fibroblast_meningioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.78e-11 | 3 |
stem cell of epidermis | 2.78e-11 | 3 |
meningothelial cell | 2.82e-09 | 1 |
perirenal preadipocyte | 4.54e-09 | 1 |
hair follicle cell | 4.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.78e-11 | 3 |
papillary layer of dermis | 2.78e-11 | 3 |
hair follicle | 4.16e-07 | 5 |
hair follicle placode | 4.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.82e-09 | 1 |
meningioma | 2.82e-09 | 1 |