FFCP PHASE1:Hg19::chr3:123322805..123322809,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:123322805..123322809,-
|short_description=p@chr3:123322805..123322809,-
|description=CAGE_peak_at_chr3:123322805..123322809,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:123322805..123322809,- | |||
|description=CAGE_peak_at_chr3:123322805..123322809,- | |||
|id=chr3:123322805..123322809,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002174;5.29e-10;1!CL:0000501;5.29e-10;1!CL:0000182;4.93e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,2.59e-10,1;CL:0000501,2.59e-10,1;CL:0000182,4.64e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.80e-10;1!UBERON:0010115;5.29e-10;1!UBERON:0004874;5.29e-10;1!UBERON:0004161;9.78e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;3.57e-19;2!DOID:3571;2.06e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.75e-19,2;DOID:3571,1.98e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.80e-10;1!UBERON:0001785;1.80e-10;1!UBERON:0002464;1.80e-10;1!UBERON:0004904;1.80e-10;1!UBERON:0001021;1.80e-10;1!UBERON:0002363;5.29e-10;1!UBERON:0000989;5.29e-10;1!UBERON:0001301;5.29e-10;1!UBERON:0001282;5.29e-10;1!UBERON:0007195;5.29e-10;1!UBERON:0008811;5.29e-10;1!UBERON:0009842;5.29e-10;1!UBERON:0003704;5.29e-10;1!UBERON:0001171;5.29e-10;1!UBERON:0001172;5.29e-10;1!UBERON:0002107;1.46e-07;19!UBERON:0006925;1.46e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.80e-10,1;UBERON:0001785,1.80e-10,1;UBERON:0002464,1.80e-10,1;UBERON:0004904,1.80e-10,1;UBERON:0001021,1.80e-10,1;UBERON:0003902,1.80e-10,1;UBERON:0005425,1.80e-10,1;UBERON:0000989,3.10e-10,1;UBERON:0008811,3.10e-10,1;UBERON:0006258,3.10e-10,1;UBERON:0005876,3.10e-10,1;UBERON:0004874,3.10e-10,1;UBERON:0002363,3.40e-10,1;UBERON:0007645,3.40e-10,1;UBERON:0007647,3.40e-10,1;UBERON:0010115,3.40e-10,1;UBERON:0001282,3.71e-10,1;UBERON:0009842,3.71e-10,1;UBERON:0003704,3.71e-10,1;UBERON:0001171,3.71e-10,1;UBERON:0001172,3.71e-10,1;UBERON:0007195,6.33e-10,1;UBERON:0001301,9.82e-10,1;UBERON:0002107,1.38e-07,19;UBERON:0006925,1.38e-07,19;UBERON:0008836,1.38e-07,19;UBERON:0000002,8.64e-07,6;UBERON:0001560,8.64e-07,6 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0.221729397462564,0.966182642624386,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0,1.07633781413317,0.213557388818567,0,0,0.515262646192195,0.772921620136887,0.744467425326359,0.168776332241266,0.0974370051611986,0.504867548488229,0.368199594569197,0,1.06502877754984,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0.468565659970853,0,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0.34444334449382,0.546273504020151,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.577076851905779,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0.222617410045812,0,0.211125408127993,0.398495976502139,0.276283915531148,0,0.409074730008619,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.435753854075961,1.67308493134324,1.23120413606075,1.36730467016401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0.432777279484182,0,0,0,0.296521128680622,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0.959293472527256,0.19871461170299,0.189932387867636,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0.124252535565433,0,1.08723364858891,1.255234155748,0.305994652908965,0.288950589901519,0,0.273810757783986,0,1.71906176567983,0,0,0.458320848023367,0.717873024576814,0,0,0,0,2.52209918479682,1.16495949527454,0,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.236417121897595,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.258565912723101,0,0.342173675768659,0,0.427149650270779,0,0,0,0,0,0,0.544017803369474,0,0,0.655745261419609,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.37494122388632,0,0,0.470531639396343,0,0,0,0,0,0,0.50313580350515,0.889811221596536,0,0.151230923763239,0,0,0.159296767163702,0,0,0,1.06336685823198,0.521745061811734,0.601030435988874,0.761610424337591,0,0,0.107410557042488,0,0.398095888698616,0.400027764663154,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0.244736704506468,0.537266523244462,0.926404341482917,0.219284049578707,0,0,0,0,0.345430341731199,0.607719912354764,0.276516872303462,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0.157265941855896,0,1.01839517972415,0,0.247871528518004,0,0,0.788617450012533,0,0,1.2249819094128,0.0642292250964595,0,0,0,0,0,0.161475645631851,4.28308260777463,0.588886311006154,0,0,0.577628330751691,0.381382095467167,0,0.795664888465099,0.526472298444801,1.0085253435176,0,0,0,0,0,0,0.206686796501184,0,0,0,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0,0.514464028312255,0.135939465953663,0,0.118193840883968,0.111231401892069,0.156986185701028,0.157115589916002,0,0,0.647782773655864,0,0.142953088353313,0,0,0,2.40513409419076,0.207216164163037,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0.121917924982269,0.647428837187895,0.205325613712494,0,0,0,0,0.118920090777569,0,0,0,0.231522474323834,0.65567868151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| ||
|short_description=p@chr3:123322805..123322809,- | |||
}} | }} |
Latest revision as of 15:08, 29 July 2015
Short description: | p@chr3:123322805..123322809, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:123322805..123322809, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 2.59e-10 | 1 |
granulosa cell | 2.59e-10 | 1 |
hepatocyte | 4.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.80e-10 | 1 |
cranial nerve | 1.80e-10 | 1 |
nerve trunk | 1.80e-10 | 1 |
nerve connecting eye with brain | 1.80e-10 | 1 |
nerve | 1.80e-10 | 1 |
retinal neural layer | 1.80e-10 | 1 |
presumptive neural retina | 1.80e-10 | 1 |
penis | 3.10e-10 | 1 |
intromittent organ | 3.10e-10 | 1 |
lateral plate mesenchyme | 3.10e-10 | 1 |
undifferentiated genital tubercle | 3.10e-10 | 1 |
somatopleure | 3.10e-10 | 1 |
dura mater | 3.40e-10 | 1 |
future meninx | 3.40e-10 | 1 |
ectomeninx | 3.40e-10 | 1 |
future dura mater | 3.40e-10 | 1 |
intralobular bile duct | 3.71e-10 | 1 |
acinus | 3.71e-10 | 1 |
intrahepatic bile duct | 3.71e-10 | 1 |
portal lobule | 3.71e-10 | 1 |
hepatic acinus | 3.71e-10 | 1 |
stroma of bone marrow | 6.33e-10 | 1 |
epididymis | 9.82e-10 | 1 |
liver | 1.38e-07 | 19 |
digestive gland | 1.38e-07 | 19 |
liver bud | 1.38e-07 | 19 |
uterine cervix | 8.64e-07 | 6 |
neck of organ | 8.64e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.75e-19 | 2 |
liver cancer | 1.98e-10 | 1 |