FFCP PHASE1:Hg19::chr3:113603761..113603770,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-374bp_to_ENST00000478867_5end | |||
|cluster_id=chr3:113603761..113603770,+ | |||
|description=CAGE_peak_1_at_ENST00000478867_5end | |||
|id=chr3:113603761..113603770,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.12e-35!42;CL:0000860!7.12e-32!45;CL:0000557!1.30e-24!71;CL:0000839!1.18e-23!70;CL:0000766!2.64e-22!76;CL:0002009!6.08e-22!65;CL:0002194!1.62e-21!63;CL:0000576!1.62e-21!63;CL:0000040!1.62e-21!63;CL:0000559!1.62e-21!63;CL:0000763!3.99e-17!112;CL:0000049!3.99e-17!112;CL:0000738!3.14e-12!140;CL:0002031!1.12e-11!124;CL:0002032!1.21e-09!165;CL:0000837!1.21e-09!165;CL:0002087!1.56e-09!119;CL:0000037!3.30e-09!172;CL:0000566!3.30e-09!172;CL:0000988!5.44e-08!182;CL:0000197!7.89e-07!6;CL:0000098!7.89e-07!6;CL:0002167!7.89e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.82e-14;33!CL:0002057;7.82e-14;33!CL:0002588;9.54e-13;2!CL:0000473;3.55e-10;39!CL:0000234;3.55e-10;39!CL:0000197;1.36e-09;6!CL:0000098;1.36e-09;6!CL:0002167;1.36e-09;6!CL:0000576;4.80e-08;48!CL:0000075;1.77e-07;27!CL:0000342;3.29e-07;1!CL:0002565;3.29e-07;1!CL:0000306;5.26e-07;4!CL:0002222;5.26e-07;4!CL:0002224;5.26e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,1.22e-12,2;CL:0000860,5.07e-12,42;CL:0002057,5.07e-12,42;CL:0000473,2.64e-10,48;CL:0000234,2.64e-10,48;CL:0000197,6.16e-10,6;CL:0000098,6.16e-10,6;CL:0002167,6.16e-10,6;CL:0002194,6.63e-08,59;CL:0000576,6.63e-08,59;CL:0000040,6.63e-08,59;CL:0000559,6.63e-08,59;CL:0000075,1.25e-07,27;CL:0000766,1.29e-07,72;CL:0002009,1.35e-07,61;CL:0000306,3.85e-07,4;CL:0002222,3.85e-07,4;CL:0002224,3.85e-07,4;CL:0000342,4.34e-07,1;CL:0002565,4.34e-07,1;CL:0000839,6.63e-07,66;CL:0000557,8.85e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;5.09e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.17e-20!80;UBERON:0001474!4.38e-18!86;UBERON:0004765!3.33e-16!101;UBERON:0001434!3.33e-16!101;UBERON:0002390!4.14e-14!102;UBERON:0003061!4.14e-14!102;UBERON:0002405!1.20e-13!115;UBERON:0002193!1.33e-13!112;UBERON:0002204!1.39e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;3.29e-07;1!UBERON:0001769;3.29e-07;1!UBERON:0010077;5.26e-07;4!UBERON:0005389;5.26e-07;4!UBERON:0000484;5.26e-07;4!UBERON:0000965;5.26e-07;4!UBERON:0001803;5.26e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,3.85e-07,4;UBERON:0005389,3.85e-07,4;UBERON:0000484,3.85e-07,4;UBERON:0002546,3.85e-07,4;UBERON:0000965,3.85e-07,4;UBERON:0001803,3.85e-07,4;UBERON:0003073,3.85e-07,4;UBERON:0005426,3.85e-07,4;UBERON:0002506,4.34e-07,1;UBERON:0001769,4.34e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0,0,1.54816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.872389432677388,0.377875943688809,0.970336244751265,0.929716147622738,0.822335776043652,0.619412741790207,1.1507695692886,0.768482119587302,0.945928919554341,0.344745680736619,1.29096936716765,1.35426486594342,1.31769637679823,1.36453075028923,0.449446968890169,0.612167784741805,0.962787081228281,0.639337125799041,0.329851300186716,1.19678194572979,0,0.870627715885752,0.56738522469114,1.24564449799115,1.00499466102697,1.0429658368404,0.65156653411535,0.605399502633369,0.736555271975129,1.26584954976354,0,0.637812899895131,0,0.673971786878971,0.300353785683013,0.964353520182481,0,0.19891667719909,0,0,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0.501559486172034,0,0,0,0.334231370655521,0,0.443067789167242,0,0.384273959177026,0.260118695119756,1.15106533222573,0,0,0.296573126324121,1.33770414044857,1.04535523804977,0.453237370790265,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42469085228218,0,0,0,0,0,0,0,0,0,0.10366105501537,0.756962552626885,0.72995471815166,0,0,0,0,0,0.709840800239063,0,0.482022059766964,0.661763836394364,0.435758888184812,0.71181185733329,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,0,2.78232971940184,1.40890433082986,0,1.38895653772983,0.761016608938393,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0,0,0,0,0.704387472105808,0.829312462163088,0.432359860250884,0.6312121671319,0.507983154337352,0,0,0,0,0,1.14330573052231,0,0,0,0,0,1.690605505112,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,2.55175500661265,0,0,0,0,0,0,2.70362119990049,1.78428988797162,0.630809660135739,1.99140405487612,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,1.00387946542836,1.47373561519682,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0.973865820823666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0.111443384277478,0,0.95497793895076,0.593929361665277,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0,3.05163472634166,0.110579259931225,0,0,0,0,0,0,0,0,0,1.27600463892768,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0.643012593860077,0.825236619583403,1.24632101408756,0.674921674654501,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0,0,0,0,0,1.39210127963548,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0.490696182767533,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0.80057074828547,0,0,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.981542335574726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@ENST00000478867 | |||
}} |
Latest revision as of 14:29, 29 July 2015
Short description: | p1@ENST00000478867 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000478867_5end |
Coexpression cluster: | NA |
Association with transcript: | -374bp_to_ENST00000478867_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 1.22e-12 | 2 |
classical monocyte | 5.07e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.07e-12 | 42 |
defensive cell | 2.64e-10 | 48 |
phagocyte | 2.64e-10 | 48 |
receptor cell | 6.16e-10 | 6 |
sensory epithelial cell | 6.16e-10 | 6 |
olfactory epithelial cell | 6.16e-10 | 6 |
monopoietic cell | 6.63e-08 | 59 |
monocyte | 6.63e-08 | 59 |
monoblast | 6.63e-08 | 59 |
promonocyte | 6.63e-08 | 59 |
columnar/cuboidal epithelial cell | 1.25e-07 | 27 |
myeloid leukocyte | 1.29e-07 | 72 |
macrophage dendritic cell progenitor | 1.35e-07 | 61 |
crystallin accumulating cell | 3.85e-07 | 4 |
vertebrate lens cell | 3.85e-07 | 4 |
lens epithelial cell | 3.85e-07 | 4 |
pigment cell (sensu Vertebrata) | 4.34e-07 | 1 |
iris pigment epithelial cell | 4.34e-07 | 1 |
myeloid lineage restricted progenitor cell | 6.63e-07 | 66 |
granulocyte monocyte progenitor cell | 8.85e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 3.85e-07 | 4 |
transparent eye structure | 3.85e-07 | 4 |
simple cuboidal epithelium | 3.85e-07 | 4 |
cranial placode | 3.85e-07 | 4 |
lens of camera-type eye | 3.85e-07 | 4 |
epithelium of lens | 3.85e-07 | 4 |
lens placode | 3.85e-07 | 4 |
lens vesicle | 3.85e-07 | 4 |
iris epithelium | 4.34e-07 | 1 |
iris | 4.34e-07 | 1 |