FFCP PHASE1:Hg19::chr3:112359729..112359753,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112359729..112359753,+ | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_at_chr3:112359729..112359753,+ | |description=CAGE_peak_at_chr3:112359729..112359753,+ | ||
|id=chr3:112359729..112359753,+ | |id=chr3:112359729..112359753,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.87e-21!180;CL:0000057!2.00e-17!75;CL:0002334!2.00e-09!12;CL:0002620!1.08e-08!23;CL:0000680!1.16e-07!57;CL:0000056!1.16e-07!57;CL:0000355!1.16e-07!57;CL:0002494!7.60e-07!16 | |ontology_enrichment_celltype=CL:0000055!3.87e-21!180;CL:0000057!2.00e-17!75;CL:0002334!2.00e-09!12;CL:0002620!1.08e-08!23;CL:0000680!1.16e-07!57;CL:0000056!1.16e-07!57;CL:0000355!1.16e-07!57;CL:0002494!7.60e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.01e-13;4!CL:0002547;1.01e-13;4!CL:0002615;3.44e-11;3!CL:0002580;2.74e-10;3!CL:0002334;1.66e-09;12!CL:0000136;3.67e-09;13!CL:0002617;9.29e-08;2!CL:0002561;2.07e-07;2!CL:0002570;6.26e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.35e-14,15;CL:1000306,1.42e-13,4;CL:0002547,1.42e-13,4;CL:0002615,2.26e-11,3;CL:0000057,3.20e-11,76;CL:0002580,2.09e-10,3;CL:0002334,1.50e-09,12;CL:0002617,7.36e-08,2;CL:0002561,2.30e-07,2;CL:0000048,2.93e-07,427;CL:0002320,3.38e-07,361;CL:0002570,4.57e-07,8;CL:0000723,5.19e-07,433;CL:0000134,6.07e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.77e-07;5!DOID:450;5.77e-07;5!DOID:66;5.77e-07;5!DOID:423;5.77e-07;5!DOID:0080000;5.77e-07;5!DOID:11722;5.77e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.51e-07,5;DOID:450,4.51e-07,5;DOID:66,4.51e-07,5;DOID:423,4.51e-07,5;DOID:0080000,4.51e-07,5;DOID:11722,4.51e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.78e-07!63;UBERON:0001015!1.78e-07!63;UBERON:0000383!1.78e-07!63;UBERON:0000486!2.28e-07!82;UBERON:0001134!2.55e-07!61;UBERON:0002036!2.55e-07!61;UBERON:0003082!2.55e-07!61;UBERON:0000914!3.43e-07!83;UBERON:0002329!3.43e-07!83;UBERON:0003077!3.43e-07!83;UBERON:0003059!3.43e-07!83;UBERON:0007282!3.43e-07!83;UBERON:0009618!3.43e-07!83;UBERON:0007285!3.43e-07!83;UBERON:0004290!3.95e-07!70;UBERON:0000948!8.43e-07!24;UBERON:0005498!8.43e-07!24;UBERON:0004140!8.43e-07!24;UBERON:0009881!8.43e-07!24;UBERON:0004141!8.43e-07!24;UBERON:0003084!8.43e-07!24;UBERON:0007005!8.43e-07!24;UBERON:0004139!8.43e-07!24;UBERON:0004291!8.43e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.19e-18;9!UBERON:0000042;1.19e-18;9!UBERON:0003688;9.92e-15;6!UBERON:0002358;9.92e-15;6!UBERON:0003684;9.92e-15;6!UBERON:0001178;9.92e-15;6!UBERON:0004797;1.01e-13;4!UBERON:0000415;1.01e-13;4!UBERON:0007240;1.01e-13;4!UBERON:0005742;1.01e-13;4!UBERON:0005734;1.01e-13;4!UBERON:0004664;1.01e-13;4!UBERON:0004663;1.01e-13;4!UBERON:0001013;3.12e-08;14!UBERON:0000310;5.07e-08;10!UBERON:0005406;5.10e-08;2!UBERON:0005933;2.07e-07;2!UBERON:0005942;2.07e-07;2!UBERON:0005932;2.07e-07;2!UBERON:0001443;2.91e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.89e-15,6;UBERON:0002358,7.89e-15,6;UBERON:0003684,7.89e-15,6;UBERON:0001178,7.89e-15,6;UBERON:0004457,8.28e-14,12;UBERON:0000042,8.28e-14,12;UBERON:0000415,1.42e-13,4;UBERON:0007240,1.42e-13,4;UBERON:0005742,1.42e-13,4;UBERON:0005734,1.42e-13,4;UBERON:0004664,1.42e-13,4;UBERON:0004663,1.42e-13,4;UBERON:0001013,2.32e-08,14;UBERON:0000310,4.01e-08,10;UBERON:0005406,4.70e-08,2;UBERON:0002384,5.81e-08,371;UBERON:0004797,8.94e-08,7;UBERON:0005933,2.30e-07,2;UBERON:0005942,2.30e-07,2;UBERON:0005932,2.30e-07,2;UBERON:0001443,2.35e-07,11 | |||
|phase1_expression=1.63510541343501,2.14100523890983,1.83240725324762,2.00146596706261,5.81049422755474,13.0850778615055,0,0,0,0,0,0.218441372130172,0.263766978228454,0.247532705920093,1.32558950291166,0,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,2.89151321907653,0.50133791063589,1.88300474649071,0,0.973269740605272,0,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,4.47274756525787,1.51956613997496,1.58891016975863,6.3104056564739,1.06400514659507,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.352303495931295,0,0.421352420106746,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.453728732640084,4.30535125653269,0.427114777637135,1.69545520927649,6.60200411385685,0.309157587715317,0.772921620136887,0.37223371266318,1.18143432568886,0.194874010322397,5.04867548488229,0.828449087780694,0,4.26011511019937,0.503760491138201,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,0,2.57296375277154,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.646358578788889,0,1.690605505112,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,1.58390374586686,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,1.44781306667579,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0.813795071099207,1.45579603071565,2.85486382075459,0.630809660135739,1.28855556491985,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0.606255142892519,0,0.30239029332968,1.98486246255021,1.2276957863045,1.40330047216537,2.17836553734692,0,4.02134802859019,1.48418066444991,0.616838775210622,0.532685175939381,0.328508624055237,0.519254429183621,0.464841513839837,0,0,0,0.803701137152247,0.364182336013434,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0,0.924291702687866,0.15350367472613,0.689182862422653,0.214840489736547,0.145016693914229,0.170453254832202,0,0,0.192190067365106,0,0,0.929691098594572,4.09256050879832,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0.78494864019923,0.359744915166629,2.19629623788844,0.706874414074119,0.404364963146632,0,0.842516912477962,0,0,0,0.409499734223957,0.989838023675989,1.13008116620243,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0.430234056612155,0.491245205065606,0,0,2.32218398827431,4.93942339439853,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0,0,0.933118762985422,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0.113942055847001,0,0,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0.300646838828985,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0.343972064943233,0,0,0,0,0,0.677942222341597,0.137041924646751,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.851940108927109,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,2.21922344601045,0.189403005275089,1.25783950876288,1.77962244319307,0.686520205190771,1.20984739010591,0.15543720058278,0,0.159296767163702,0,0.155262956876259,1.24411862352257,0.797525143673985,0,0.601030435988874,3.04644169735036,0,0,0,0,1.59238355479446,0.400027764663154,1.71697852591396,2.02049693259551,0,0,0.643324774124777,0,0.680117776536817,0.694567422971502,0.244736704506468,1.07453304648892,0.617602894321944,3.50854479325931,0.353378291891762,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.247871528518004,0,0.636008701306837,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0.762764190934334,0,0,0.150420656698515,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0,0.17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| ||
|short_description=p@chr3:112359729..112359753,+ | |short_description=p@chr3:112359729..112359753,+ | ||
}} | }} |
Latest revision as of 14:21, 29 July 2015
Short description: | p@chr3:112359729..112359753, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112359729..112359753, + |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.35e-14 | 15 |
fibroblast of tunica adventitia of artery | 1.42e-13 | 4 |
fibroblast of the aortic adventitia | 1.42e-13 | 4 |
adipocyte of omentum tissue | 2.26e-11 | 3 |
fibroblast | 3.20e-11 | 76 |
preadipocyte of the breast | 2.09e-10 | 3 |
preadipocyte | 1.50e-09 | 12 |
adipocyte of breast | 7.36e-08 | 2 |
outer root sheath cell | 2.30e-07 | 2 |
multi fate stem cell | 2.93e-07 | 427 |
connective tissue cell | 3.38e-07 | 361 |
mesenchymal stem cell of adipose | 4.57e-07 | 8 |
somatic stem cell | 5.19e-07 | 433 |
mesenchymal cell | 6.07e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.89e-15 | 6 |
peritoneum | 7.89e-15 | 6 |
abdominal cavity | 7.89e-15 | 6 |
visceral peritoneum | 7.89e-15 | 6 |
cavity lining | 8.28e-14 | 12 |
serous membrane | 8.28e-14 | 12 |
artery wall | 1.42e-13 | 4 |
tunica adventitia of artery | 1.42e-13 | 4 |
adventitia | 1.42e-13 | 4 |
tunica adventitia of blood vessel | 1.42e-13 | 4 |
aorta tunica adventitia | 1.42e-13 | 4 |
aorta wall | 1.42e-13 | 4 |
adipose tissue | 2.32e-08 | 14 |
breast | 4.01e-08 | 10 |
perirenal fat | 4.70e-08 | 2 |
connective tissue | 5.81e-08 | 371 |
blood vessel layer | 8.94e-08 | 7 |
hair root sheath | 2.30e-07 | 2 |
hair outer root sheath | 2.30e-07 | 2 |
bulb of hair follicle | 2.30e-07 | 2 |
chest | 2.35e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.51e-07 | 5 |
myotonic disease | 4.51e-07 | 5 |
muscle tissue disease | 4.51e-07 | 5 |
myopathy | 4.51e-07 | 5 |
muscular disease | 4.51e-07 | 5 |
myotonic dystrophy | 4.51e-07 | 5 |