FFCP PHASE1:Hg19::chr3:112320772..112320784,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112320772..112320784,- | |||
|coexpression_cluster_id=C333 | |coexpression_cluster_id=C333 | ||
|description=CAGE_peak_at_chr3:112320772..112320784,- | |description=CAGE_peak_at_chr3:112320772..112320784,- | ||
|id=chr3:112320772..112320784,- | |id=chr3:112320772..112320784,- | ||
|ontology_enrichment_celltype=CL:0000057!1.12e-17!75;CL:0002620!7.60e-14!23;CL:0000055!8.14e-10!180;CL:0002334!1.02e-09!12;CL:0000136!5.57e-08!15;CL:1000306!3.50e-07!4;CL:0002547!3.50e-07!4 | |ontology_enrichment_celltype=CL:0000057!1.12e-17!75;CL:0002620!7.60e-14!23;CL:0000055!8.14e-10!180;CL:0002334!1.02e-09!12;CL:0000136!5.57e-08!15;CL:1000306!3.50e-07!4;CL:0002547!3.50e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002579;8.03e-26;3!CL:0000135;5.88e-12;3!CL:0002615;5.88e-12;3!CL:0000388;5.88e-12;3!CL:0000136;1.28e-10;13!CL:0000511;4.26e-10;1!CL:0002625;4.26e-10;1!CL:0000216;4.26e-10;1!CL:0002616;4.26e-10;1!CL:1000306;3.43e-09;4!CL:0002547;3.43e-09;4!CL:0002334;7.47e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.72e-25,3;CL:0002615,4.46e-12,3;CL:0000135,7.36e-12,3;CL:0000388,7.36e-12,3;CL:0002616,4.09e-10,1;CL:0000511,4.46e-10,1;CL:0002625,4.46e-10,1;CL:0000216,4.46e-10,1;CL:0000136,2.80e-09,15;CL:1000306,3.16e-09,4;CL:0002547,3.16e-09,4;CL:0002334,8.97e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.58e-08!5;DOID:450!1.58e-08!5;DOID:66!1.58e-08!5;DOID:423!1.58e-08!5;DOID:0080000!1.58e-08!5;DOID:11722!1.58e-08!5 | |ontology_enrichment_disease=DOID:17!1.58e-08!5;DOID:450!1.58e-08!5;DOID:66!1.58e-08!5;DOID:423!1.58e-08!5;DOID:0080000!1.58e-08!5;DOID:11722!1.58e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:2513;5.53e-10;1!DOID:3369;1.36e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,6.31e-10,1;DOID:3369,1.15e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.73e-11!45;UBERON:0002416!1.73e-11!45;UBERON:0002097!8.80e-10!40;UBERON:0003688!4.34e-08!6;UBERON:0002358!4.34e-08!6;UBERON:0003684!4.34e-08!6;UBERON:0001178!4.34e-08!6;UBERON:0000415!3.50e-07!4;UBERON:0007240!3.50e-07!4;UBERON:0005742!3.50e-07!4;UBERON:0005734!3.50e-07!4;UBERON:0004664!3.50e-07!4;UBERON:0004663!3.50e-07!4;UBERON:0004457!6.81e-07!12;UBERON:0000042!6.81e-07!12 | |ontology_enrichment_uberon=UBERON:0002199!1.73e-11!45;UBERON:0002416!1.73e-11!45;UBERON:0002097!8.80e-10!40;UBERON:0003688!4.34e-08!6;UBERON:0002358!4.34e-08!6;UBERON:0003684!4.34e-08!6;UBERON:0001178!4.34e-08!6;UBERON:0000415!3.50e-07!4;UBERON:0007240!3.50e-07!4;UBERON:0005742!3.50e-07!4;UBERON:0005734!3.50e-07!4;UBERON:0004664!3.50e-07!4;UBERON:0004663!3.50e-07!4;UBERON:0004457!6.81e-07!12;UBERON:0000042!6.81e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.50e-34;6!UBERON:0002358;1.50e-34;6!UBERON:0003684;1.50e-34;6!UBERON:0001178;1.50e-34;6!UBERON:0004457;9.22e-33;9!UBERON:0000042;9.22e-33;9!UBERON:0007846;5.88e-12;3!UBERON:0000043;5.88e-12;3!UBERON:0007845;5.88e-12;3!UBERON:0001136;4.26e-10;1!UBERON:0001343;4.26e-10;1!UBERON:0004910;4.26e-10;1!UBERON:0004813;4.26e-10;1!UBERON:0004797;3.43e-09;4!UBERON:0000415;3.43e-09;4!UBERON:0007240;3.43e-09;4!UBERON:0005742;3.43e-09;4!UBERON:0005734;3.43e-09;4!UBERON:0004664;3.43e-09;4!UBERON:0004663;3.43e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.99e-34,6;UBERON:0002358,1.99e-34,6;UBERON:0003684,1.99e-34,6;UBERON:0001178,1.99e-34,6;UBERON:0004457,1.66e-24,12;UBERON:0000042,1.66e-24,12;UBERON:0007846,7.36e-12,3;UBERON:0000043,7.36e-12,3;UBERON:0007845,7.36e-12,3;UBERON:0001136,4.46e-10,1;UBERON:0001343,4.46e-10,1;UBERON:0004910,4.46e-10,1;UBERON:0005154,4.46e-10,1;UBERON:0005295,4.46e-10,1;UBERON:0004813,4.46e-10,1;UBERON:0005297,4.46e-10,1;UBERON:0005294,4.46e-10,1;UBERON:0010141,4.46e-10,1;UBERON:0005891,4.46e-10,1;UBERON:0000415,3.16e-09,4;UBERON:0007240,3.16e-09,4;UBERON:0005742,3.16e-09,4;UBERON:0005734,3.16e-09,4;UBERON:0004664,3.16e-09,4;UBERON:0004663,3.16e-09,4;UBERON:0004923,6.75e-09,66;UBERON:0004458,1.28e-07,49 | |||
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| ||
|short_description=p@chr3:112320772..112320784,- | |short_description=p@chr3:112320772..112320784,- | ||
}} | }} |
Latest revision as of 14:17, 29 July 2015
Short description: | p@chr3:112320772..112320784, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112320772..112320784, - |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.72e-25 | 3 |
adipocyte of omentum tissue | 4.46e-12 | 3 |
fibrocyte | 7.36e-12 | 3 |
tendon cell | 7.36e-12 | 3 |
perirenal adipocyte cell | 4.09e-10 | 1 |
androgen binding protein secreting cell | 4.46e-10 | 1 |
seminiferous tubule epithelial cell | 4.46e-10 | 1 |
Sertoli cell | 4.46e-10 | 1 |
fat cell | 2.80e-09 | 15 |
fibroblast of tunica adventitia of artery | 3.16e-09 | 4 |
fibroblast of the aortic adventitia | 3.16e-09 | 4 |
preadipocyte | 8.97e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.99e-34 | 6 |
peritoneum | 1.99e-34 | 6 |
abdominal cavity | 1.99e-34 | 6 |
visceral peritoneum | 1.99e-34 | 6 |
cavity lining | 1.66e-24 | 12 |
serous membrane | 1.66e-24 | 12 |
dense regular connective tissue | 7.36e-12 | 3 |
tendon | 7.36e-12 | 3 |
regular connective tissue | 7.36e-12 | 3 |
mesothelium | 4.46e-10 | 1 |
seminiferous tubule of testis | 4.46e-10 | 1 |
epithelium of male gonad | 4.46e-10 | 1 |
epithelial cord | 4.46e-10 | 1 |
sex cord | 4.46e-10 | 1 |
seminiferous tubule epithelium | 4.46e-10 | 1 |
testis sex cord | 4.46e-10 | 1 |
genital ridge | 4.46e-10 | 1 |
primitive sex cord of indifferent gonad | 4.46e-10 | 1 |
coelomic epithelium | 4.46e-10 | 1 |
artery wall | 3.16e-09 | 4 |
tunica adventitia of artery | 3.16e-09 | 4 |
adventitia | 3.16e-09 | 4 |
tunica adventitia of blood vessel | 3.16e-09 | 4 |
aorta tunica adventitia | 3.16e-09 | 4 |
aorta wall | 3.16e-09 | 4 |
organ component layer | 6.75e-09 | 66 |
body cavity or lining | 1.28e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 6.31e-10 | 1 |
peripheral primitive neuroectodermal tumor | 1.15e-09 | 1 |