FFCP PHASE1:Hg19::chr3:111632180..111632198,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:111632180..111632198,+ | |||
|description=CAGE_peak_at_chr3:111632180..111632198,+ | |description=CAGE_peak_at_chr3:111632180..111632198,+ | ||
|id=chr3:111632180..111632198,+ | |id=chr3:111632180..111632198,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.00e-10!9;CL:0000077!1.40e-08!19 | |ontology_enrichment_celltype=CL:0000188!1.00e-10!9;CL:0000077!1.40e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0000188;7.88e-26;9!CL:0002379;2.56e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,6.72e-26,9;CL:0002379,2.75e-15,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;1.34e-15;1!DOID:3620;2.56e-15;1!DOID:3565;2.56e-15;1!DOID:3093;4.21e-11;11!DOID:3350;1.86e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.34e-15,1;DOID:3620,2.75e-15,1;DOID:3565,2.75e-15,1;DOID:3093,4.00e-11,11;DOID:3350,1.86e-08,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.08e-14;16!UBERON:0002036;1.08e-14;16!UBERON:0002385;2.47e-07;31!UBERON:0001015;2.47e-07;31!UBERON:0000383;2.47e-07;31 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,4.15684088656124,0.924291702687866,0.921022048356777,3.72158745708233,0,0.145016693914229,1.96021243057032,4.71869788927708,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0.284609546029793,2.77349346026277,0,0,0.0870592065804026,0.34945333648406,2.75177651954586,0,0,0,0,0,0,0.548167698587004,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,1.63085047288337,1.77824838730966,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0.0787831823072236,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,3.91491437947817,0.453411851024545,0.231522474323834,0,3.04451029838529,0.926404341482917,0,0,0.964570191354574,0.675769762612291,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.138314504928436,0,0,0,0,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0.135075169236789,0,0.413373593002368,0.253663240775627,0,0,0,0,0.127762427639595,0,0,0,0,0.620916591138472,0,0,0,0.197318320688547,0.118193840883968,0.111231401892069,0,0,2.24217730651031,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0.160482733378337,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0,0,0,0,0,0,0,1.28072815053259,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,4.15684088656124,0.924291702687866,0.921022048356777,3.72158745708233,0,0.145016693914229,1.96021243057032,4.71869788927708,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0.284609546029793,2.77349346026277,0,0,0.0870592065804026,0.34945333648406,2.75177651954586,0,0,0,0,0,0,0.548167698587004,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,1.63085047288337,1.77824838730966,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0.0787831823072236,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,3.91491437947817,0.453411851024545,0.231522474323834,0,3.04451029838529,0.926404341482917,0,0,0.964570191354574,0.675769762612291,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.138314504928436,0,0,0,0,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0.135075169236789,0,0.413373593002368,0.253663240775627,0,0,0,0,0.127762427639595,0,0,0,0,0.620916591138472,0,0,0,0.197318320688547,0.118193840883968,0.111231401892069,0,0,2.24217730651031,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0.160482733378337,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0,0,0,0,0,0,0,1.28072815053259,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:111632180..111632198,+ | |short_description=p@chr3:111632180..111632198,+ | ||
}} | }} |
Latest revision as of 14:12, 29 July 2015
Short description: | p@chr3:111632180..111632198, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:111632180..111632198, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 6.72e-26 | 9 |
meningothelial cell | 2.75e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.34e-15 | 1 |
central nervous system cancer | 2.75e-15 | 1 |
meningioma | 2.75e-15 | 1 |
nervous system cancer | 4.00e-11 | 11 |
mesenchymal cell neoplasm | 1.86e-08 | 2 |