FFCP PHASE1:Hg19::chr3:111631881..111631893,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:111631881..111631893,+ | |||
|coexpression_cluster_id=C2712 | |||
|description=CAGE_peak_at_chr3:111631881..111631893,+ | |description=CAGE_peak_at_chr3:111631881..111631893,+ | ||
|id=chr3:111631881..111631893,+ | |id=chr3:111631881..111631893,+ | ||
|ontology_enrichment_celltype=CL:0000077!1.50e-14!19;CL:0002379!1.55e-07!1 | |ontology_enrichment_celltype=CL:0000077!1.50e-14!19;CL:0002379!1.55e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002379;1.69e-21;1!CL:0000077;5.26e-17;19!CL:0002097;3.89e-11;2!CL:0000174;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.88e-21,1;CL:0000077,5.48e-17,19;CL:0002097,4.09e-11,2;CL:0000174,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.98e-21;1!UBERON:0003056;7.50e-08;3 | |||
|ontology_enrichment_disease=DOID:3620!1.55e-07!1;DOID:3565!1.55e-07!1;DOID:6193!4.31e-07!1 | |ontology_enrichment_disease=DOID:3620!1.55e-07!1;DOID:3565!1.55e-07!1;DOID:6193!4.31e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3620;1.69e-21;1!DOID:3565;1.69e-21;1!DOID:170;4.84e-14;6!DOID:4074;3.89e-11;2!DOID:4905;3.89e-11;2!DOID:3498;3.89e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.88e-21,1;DOID:3565,1.88e-21,1;DOID:170,4.84e-14,6;DOID:4074,3.70e-11,2;DOID:4905,3.70e-11,2;DOID:3498,3.70e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000941!2.10e-07!1;UBERON:0004904!2.10e-07!1;UBERON:0002464!2.10e-07!1;UBERON:0001021!2.10e-07!1;UBERON:0001785!2.10e-07!1;UBERON:0000989!3.20e-07!1;UBERON:0008811!3.20e-07!1;UBERON:0006258!3.20e-07!1;UBERON:0005876!3.20e-07!1;UBERON:0004874!3.20e-07!1;UBERON:0007190!8.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.98e-21;1!UBERON:0001785;6.98e-21;1!UBERON:0002464;6.98e-21;1!UBERON:0004904;6.98e-21;1!UBERON:0001021;6.98e-21;1!UBERON:0003714;3.89e-11;2!UBERON:0005162;3.89e-11;2!UBERON:0000122;3.89e-11;2!UBERON:0002369;7.50e-08;3!UBERON:0001235;7.50e-08;3!UBERON:0006858;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.16e-21,1;UBERON:0001785,5.16e-21,1;UBERON:0002464,5.16e-21,1;UBERON:0004904,5.16e-21,1;UBERON:0001021,5.16e-21,1;UBERON:0003902,5.16e-21,1;UBERON:0005425,5.16e-21,1;UBERON:0003714,3.35e-11,2;UBERON:0005162,3.35e-11,2;UBERON:0000122,3.35e-11,2;UBERON:0002369,7.76e-08,3;UBERON:0001235,7.76e-08,3;UBERON:0006858,7.76e-08,3 | |||
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|short_description=p@chr3:111631881..111631893,+ | |short_description=p@chr3:111631881..111631893,+ | ||
}} | }} |
Latest revision as of 14:12, 29 July 2015
Short description: | p@chr3:111631881..111631893, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:111631881..111631893, + |
Coexpression cluster: | C2712_mesothelioma_endometrial_ductal_meningioma_epithelioid_glioblastoma_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.88e-21 | 1 |
mesothelial cell | 5.48e-17 | 19 |
cortical cell of adrenal gland | 4.09e-11 | 2 |
steroid hormone secreting cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.16e-21 | 1 |
cranial nerve | 5.16e-21 | 1 |
nerve trunk | 5.16e-21 | 1 |
nerve connecting eye with brain | 5.16e-21 | 1 |
nerve | 5.16e-21 | 1 |
retinal neural layer | 5.16e-21 | 1 |
presumptive neural retina | 5.16e-21 | 1 |
neural tissue | 3.35e-11 | 2 |
multi cell component structure | 3.35e-11 | 2 |
neuron projection bundle | 3.35e-11 | 2 |
adrenal gland | 7.76e-08 | 3 |
adrenal cortex | 7.76e-08 | 3 |
adrenal/interrenal gland | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.88e-21 | 1 |
meningioma | 1.88e-21 | 1 |
endocrine gland cancer | 4.84e-14 | 6 |
pancreas adenocarcinoma | 3.70e-11 | 2 |
pancreatic carcinoma | 3.70e-11 | 2 |
pancreatic ductal adenocarcinoma | 3.70e-11 | 2 |