FFCP PHASE1:Hg19::chr3:106556772..106556810,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:106556772..106556810,- | |||
|description=CAGE_peak_at_chr3:106556772..106556810,- | |description=CAGE_peak_at_chr3:106556772..106556810,- | ||
|id=chr3:106556772..106556810,- | |id=chr3:106556772..106556810,- | ||
|ontology_enrichment_celltype=CL:1000306!8.45e-07!4;CL:0002547!8.45e-07!4 | |ontology_enrichment_celltype=CL:1000306!8.45e-07!4;CL:0002547!8.45e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000243;1.00e-12;15!CL:0000125;1.00e-12;15!CL:0000095;1.68e-11;17!CL:0002319;2.10e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.03e-12,15;CL:0000125,1.03e-12,15;CL:0000030,1.03e-12,15;CL:0000339,1.03e-12,15;CL:0000095,1.72e-11,17;CL:0000123,1.72e-11,17;CL:0002319,2.14e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.91e-19;10!CL:0000339;1.00e-12;15!UBERON:0003104;1.19e-07;31 | |||
|ontology_enrichment_disease=DOID:3371!2.23e-07!1;DOID:4549!2.23e-07!1;DOID:5861!2.23e-07!1;DOID:6496!2.23e-07!1;DOID:5662!2.67e-07!1;DOID:0060085!3.20e-07!1;DOID:3165!3.20e-07!1;DOID:0060121!3.20e-07!1;DOID:2438!3.20e-07!1;DOID:4418!3.20e-07!1;DOID:2355!8.67e-07!1 | |ontology_enrichment_disease=DOID:3371!2.23e-07!1;DOID:4549!2.23e-07!1;DOID:5861!2.23e-07!1;DOID:6496!2.23e-07!1;DOID:5662!2.67e-07!1;DOID:0060085!3.20e-07!1;DOID:3165!3.20e-07!1;DOID:0060121!3.20e-07!1;DOID:2438!3.20e-07!1;DOID:4418!3.20e-07!1;DOID:2355!8.67e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3093;1.51e-17;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.57e-17,11 | |||
|ontology_enrichment_uberon=UBERON:0000200!2.55e-15!6;UBERON:0002619!1.99e-08!22;UBERON:0002771!2.19e-08!3;UBERON:0000955!9.79e-08!69;UBERON:0006238!9.79e-08!69;UBERON:0001869!1.44e-07!32;UBERON:0001282!1.46e-07!1;UBERON:0009842!1.46e-07!1;UBERON:0003704!1.46e-07!1;UBERON:0001171!1.46e-07!1;UBERON:0001172!1.46e-07!1;UBERON:0002780!1.71e-07!41;UBERON:0001890!1.71e-07!41;UBERON:0006240!1.71e-07!41;UBERON:0002702!1.86e-07!1;UBERON:0000956!2.17e-07!25;UBERON:0000203!2.17e-07!25;UBERON:0003080!2.71e-07!42;UBERON:0000998!3.01e-07!1;UBERON:0006868!3.01e-07!1;UBERON:0002020!4.06e-07!34;UBERON:0003528!4.06e-07!34;UBERON:0001893!4.36e-07!34;UBERON:0000415!8.45e-07!4;UBERON:0007240!8.45e-07!4;UBERON:0005742!8.45e-07!4;UBERON:0005734!8.45e-07!4;UBERON:0004664!8.45e-07!4;UBERON:0004663!8.45e-07!4;UBERON:0002902!9.73e-07!1;UBERON:0009899!9.73e-07!1 | |ontology_enrichment_uberon=UBERON:0000200!2.55e-15!6;UBERON:0002619!1.99e-08!22;UBERON:0002771!2.19e-08!3;UBERON:0000955!9.79e-08!69;UBERON:0006238!9.79e-08!69;UBERON:0001869!1.44e-07!32;UBERON:0001282!1.46e-07!1;UBERON:0009842!1.46e-07!1;UBERON:0003704!1.46e-07!1;UBERON:0001171!1.46e-07!1;UBERON:0001172!1.46e-07!1;UBERON:0002780!1.71e-07!41;UBERON:0001890!1.71e-07!41;UBERON:0006240!1.71e-07!41;UBERON:0002702!1.86e-07!1;UBERON:0000956!2.17e-07!25;UBERON:0000203!2.17e-07!25;UBERON:0003080!2.71e-07!42;UBERON:0000998!3.01e-07!1;UBERON:0006868!3.01e-07!1;UBERON:0002020!4.06e-07!34;UBERON:0003528!4.06e-07!34;UBERON:0001893!4.36e-07!34;UBERON:0000415!8.45e-07!4;UBERON:0007240!8.45e-07!4;UBERON:0005742!8.45e-07!4;UBERON:0005734!8.45e-07!4;UBERON:0004664!8.45e-07!4;UBERON:0004663!8.45e-07!4;UBERON:0002902!9.73e-07!1;UBERON:0009899!9.73e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.88e-50;1!UBERON:0009842;1.88e-50;1!UBERON:0003704;1.88e-50;1!UBERON:0001171;1.88e-50;1!UBERON:0001172;1.88e-50;1!UBERON:0001280;7.35e-18;3!UBERON:0004647;7.35e-18;3!UBERON:0002394;9.39e-14;4!UBERON:0003928;9.39e-14;4!UBERON:0002294;1.96e-08;7!UBERON:0001173;1.96e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.46e-50,1;UBERON:0009842,1.46e-50,1;UBERON:0003704,1.46e-50,1;UBERON:0001171,1.46e-50,1;UBERON:0001172,1.46e-50,1;UBERON:0001280,6.76e-18,3;UBERON:0004647,6.76e-18,3;UBERON:0005171,6.76e-18,3;UBERON:0002394,1.22e-09,6;UBERON:0003928,1.22e-09,6;UBERON:0002294,7.48e-07,9;UBERON:0001173,7.48e-07,9;UBERON:0004912,7.48e-07,9 | |||
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|short_description=p@chr3:106556772..106556810,- | |short_description=p@chr3:106556772..106556810,- | ||
}} | }} |
Latest revision as of 13:58, 29 July 2015
Short description: | p@chr3:106556772..106556810, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:106556772..106556810, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.03e-12 | 15 |
glial cell | 1.03e-12 | 15 |
glioblast | 1.03e-12 | 15 |
glioblast (sensu Vertebrata) | 1.03e-12 | 15 |
neuron associated cell | 1.72e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.72e-11 | 17 |
neural cell | 2.14e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.46e-50 | 1 |
acinus | 1.46e-50 | 1 |
intrahepatic bile duct | 1.46e-50 | 1 |
portal lobule | 1.46e-50 | 1 |
hepatic acinus | 1.46e-50 | 1 |
liver parenchyma | 6.76e-18 | 3 |
liver lobule | 6.76e-18 | 3 |
hepatic duct | 6.76e-18 | 3 |
bile duct | 1.22e-09 | 6 |
digestive system duct | 1.22e-09 | 6 |
biliary system | 7.48e-07 | 9 |
biliary tree | 7.48e-07 | 9 |
biliary bud | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.57e-17 | 11 |