FFCP PHASE1:Hg19::chr3:106556598..106556609,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:106556598..106556609,- | |||
|description=CAGE_peak_at_chr3:106556598..106556609,- | |description=CAGE_peak_at_chr3:106556598..106556609,- | ||
|id=chr3:106556598..106556609,- | |id=chr3:106556598..106556609,- | ||
|ontology_enrichment_celltype=CL:1000306!7.60e-12!4;CL:0002547!7.60e-12!4;CL:0000054!5.95e-11!2;CL:0000137!5.95e-11!2;CL:0000092!5.95e-11!2;CL:0000055!1.23e-08!180;CL:0002092!5.32e-08!10;CL:0000062!1.87e-07!11;CL:0000375!1.87e-07!11;CL:0000335!1.87e-07!11 | |ontology_enrichment_celltype=CL:1000306!7.60e-12!4;CL:0002547!7.60e-12!4;CL:0000054!5.95e-11!2;CL:0000137!5.95e-11!2;CL:0000092!5.95e-11!2;CL:0000055!1.23e-08!180;CL:0002092!5.32e-08!10;CL:0000062!1.87e-07!11;CL:0000375!1.87e-07!11;CL:0000335!1.87e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000054;3.46e-31;2!CL:0000137;3.46e-31;2!CL:0000092;3.46e-31;2!CL:1000306;2.53e-16;4!CL:0002547;2.53e-16;4!CL:0002092;2.17e-14;10!CL:0000062;8.45e-08;9!CL:0000077;8.58e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.50e-31,2;CL:0000137,5.50e-31,2;CL:0000092,5.50e-31,2;CL:0000062,1.78e-22,11;CL:0000375,1.78e-22,11;CL:0000335,1.78e-22,11;CL:1000306,1.93e-16,4;CL:0002547,1.93e-16,4;CL:0002092,2.44e-14,10;CL:0000077,1.01e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000335;1.63e-22;11 | |||
|ontology_enrichment_disease=DOID:200!5.95e-11!2;DOID:4305!5.95e-11!2;DOID:201!8.43e-08!6;DOID:0060100!8.43e-08!6 | |ontology_enrichment_disease=DOID:200!5.95e-11!2;DOID:4305!5.95e-11!2;DOID:201!8.43e-08!6;DOID:0060100!8.43e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:200;3.46e-31;2!DOID:4305;3.46e-31;2!DOID:0060085;1.65e-16;1!DOID:3165;1.65e-16;1!DOID:0060121;1.65e-16;1!DOID:2438;1.65e-16;1!DOID:4418;1.65e-16;1!DOID:201;4.37e-11;6!DOID:0060100;4.37e-11;6 | |||
|ontology_enrichment_disease_v019_2=DOID:200,5.50e-31,2;DOID:4305,5.50e-31,2;DOID:0060085,1.65e-16,1;DOID:3165,1.65e-16,1;DOID:0060121,1.65e-16,1;DOID:2438,1.65e-16,1;DOID:4418,1.65e-16,1;DOID:201,5.09e-11,6;DOID:0060100,5.09e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0000415!7.60e-12!4;UBERON:0007240!7.60e-12!4;UBERON:0005742!7.60e-12!4;UBERON:0005734!7.60e-12!4;UBERON:0004664!7.60e-12!4;UBERON:0004663!7.60e-12!4;UBERON:0004573!5.01e-08!33;UBERON:0004571!5.01e-08!33;UBERON:0000947!1.08e-07!21;UBERON:0010191!1.08e-07!21 | |ontology_enrichment_uberon=UBERON:0000415!7.60e-12!4;UBERON:0007240!7.60e-12!4;UBERON:0005742!7.60e-12!4;UBERON:0005734!7.60e-12!4;UBERON:0004664!7.60e-12!4;UBERON:0004663!7.60e-12!4;UBERON:0004573!5.01e-08!33;UBERON:0004571!5.01e-08!33;UBERON:0000947!1.08e-07!21;UBERON:0010191!1.08e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;5.10e-17;1!UBERON:0009842;5.10e-17;1!UBERON:0003704;5.10e-17;1!UBERON:0001171;5.10e-17;1!UBERON:0001172;5.10e-17;1!UBERON:0004797;2.53e-16;4!UBERON:0000415;2.53e-16;4!UBERON:0007240;2.53e-16;4!UBERON:0005742;2.53e-16;4!UBERON:0005734;2.53e-16;4!UBERON:0004664;2.53e-16;4!UBERON:0004663;2.53e-16;4!UBERON:0002371;4.26e-12;12!UBERON:0001474;2.96e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,4.72e-17,1;UBERON:0009842,4.72e-17,1;UBERON:0003704,4.72e-17,1;UBERON:0001171,4.72e-17,1;UBERON:0001172,4.72e-17,1;UBERON:0000415,1.93e-16,4;UBERON:0007240,1.93e-16,4;UBERON:0005742,1.93e-16,4;UBERON:0005734,1.93e-16,4;UBERON:0004664,1.93e-16,4;UBERON:0004663,1.93e-16,4;UBERON:0004797,8.35e-10,7 | |||
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|short_description=p@chr3:106556598..106556609,- | |short_description=p@chr3:106556598..106556609,- | ||
}} | }} |
Latest revision as of 13:58, 29 July 2015
Short description: | p@chr3:106556598..106556609, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:106556598..106556609, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.50e-31 | 2 |
osteocyte | 5.50e-31 | 2 |
osteoclast | 5.50e-31 | 2 |
osteoblast | 1.78e-22 | 11 |
osteoprogenitor cell | 1.78e-22 | 11 |
mesenchyme condensation cell | 1.78e-22 | 11 |
fibroblast of tunica adventitia of artery | 1.93e-16 | 4 |
fibroblast of the aortic adventitia | 1.93e-16 | 4 |
bone marrow cell | 2.44e-14 | 10 |
mesothelial cell | 1.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 4.72e-17 | 1 |
acinus | 4.72e-17 | 1 |
intrahepatic bile duct | 4.72e-17 | 1 |
portal lobule | 4.72e-17 | 1 |
hepatic acinus | 4.72e-17 | 1 |
artery wall | 1.93e-16 | 4 |
tunica adventitia of artery | 1.93e-16 | 4 |
adventitia | 1.93e-16 | 4 |
tunica adventitia of blood vessel | 1.93e-16 | 4 |
aorta tunica adventitia | 1.93e-16 | 4 |
aorta wall | 1.93e-16 | 4 |
blood vessel layer | 8.35e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 5.50e-31 | 2 |
bone giant cell tumor | 5.50e-31 | 2 |
organ system benign neoplasm | 1.65e-16 | 1 |
skin benign neoplasm | 1.65e-16 | 1 |
integumentary system benign neoplasm | 1.65e-16 | 1 |
dermis tumor | 1.65e-16 | 1 |
cutaneous fibrous histiocytoma | 1.65e-16 | 1 |
connective tissue cancer | 5.09e-11 | 6 |
musculoskeletal system cancer | 5.09e-11 | 6 |