FFCP PHASE1:Hg19::chr3:106464246..106464276,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:106464246..106464276,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr3:106464246..106464276,- | |description=CAGE_peak_at_chr3:106464246..106464276,- | ||
|id=chr3:106464246..106464276,- | |id=chr3:106464246..106464276,- | ||
|ontology_enrichment_celltype=CL:0000222!5.93e-22!119;CL:0000077!1.22e-17!19;CL:0000359!8.94e-17!32;CL:0000055!5.95e-15!180;CL:0000213!1.35e-13!57;CL:0000215!1.35e-13!57;CL:0000076!4.38e-12!62;CL:1000306!7.33e-12!4;CL:0002547!7.33e-12!4;CL:0000192!7.84e-12!42;CL:0000514!7.84e-12!42;CL:0000187!4.64e-11!54;CL:1000413!4.72e-11!9;CL:0000680!3.01e-10!57;CL:0000056!3.01e-10!57;CL:0000355!3.01e-10!57;CL:0000220!8.01e-10!246;CL:0000183!9.40e-10!59;CL:0002321!1.17e-09!248;CL:0000393!1.61e-09!60;CL:0000211!1.61e-09!60;CL:0002595!1.86e-09!5;CL:0000057!1.10e-08!75;CL:0000071!2.04e-08!18;CL:0002546!2.04e-08!18;CL:0002544!8.82e-08!6;CL:0002594!2.41e-07!4;CL:0002494!3.55e-07!16;CL:0002334!6.78e-07!12;CL:0002589!7.69e-07!2 | |ontology_enrichment_celltype=CL:0000222!5.93e-22!119;CL:0000077!1.22e-17!19;CL:0000359!8.94e-17!32;CL:0000055!5.95e-15!180;CL:0000213!1.35e-13!57;CL:0000215!1.35e-13!57;CL:0000076!4.38e-12!62;CL:1000306!7.33e-12!4;CL:0002547!7.33e-12!4;CL:0000192!7.84e-12!42;CL:0000514!7.84e-12!42;CL:0000187!4.64e-11!54;CL:1000413!4.72e-11!9;CL:0000680!3.01e-10!57;CL:0000056!3.01e-10!57;CL:0000355!3.01e-10!57;CL:0000220!8.01e-10!246;CL:0000183!9.40e-10!59;CL:0002321!1.17e-09!248;CL:0000393!1.61e-09!60;CL:0000211!1.61e-09!60;CL:0002595!1.86e-09!5;CL:0000057!1.10e-08!75;CL:0000071!2.04e-08!18;CL:0002546!2.04e-08!18;CL:0002544!8.82e-08!6;CL:0002594!2.41e-07!4;CL:0002494!3.55e-07!16;CL:0002334!6.78e-07!12;CL:0002589!7.69e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:1000306;6.01e-21;4!CL:0002547;6.01e-21;4!CL:0000359;7.32e-21;32!CL:0002594;1.04e-20;4!CL:0000192;1.72e-12;43!CL:0002589;3.18e-11;2!CL:0000187;5.08e-09;55!CL:0002539;5.92e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.92e-22,32;CL:1000306,4.68e-21,4;CL:0002547,4.68e-21,4;CL:0002594,1.28e-20,4;CL:0000192,1.76e-16,43;CL:0000514,1.76e-16,43;CL:0000187,7.04e-13,55;CL:0000680,3.29e-12,58;CL:0000056,3.29e-12,58;CL:0000355,3.29e-12,58;CL:0000393,1.32e-11,61;CL:0000211,1.32e-11,61;CL:0002589,3.70e-11,2;CL:0000222,4.13e-10,121;CL:0002539,6.04e-09,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.72e-12;43!CL:0000355;1.43e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr3:106464246..106464276,- | |short_description=p@chr3:106464246..106464276,- | ||
}} | }} |
Latest revision as of 13:58, 29 July 2015
Short description: | p@chr3:106464246..106464276, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:106464246..106464276, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.92e-22 | 32 |
fibroblast of tunica adventitia of artery | 4.68e-21 | 4 |
fibroblast of the aortic adventitia | 4.68e-21 | 4 |
smooth muscle cell of the umbilical artery | 1.28e-20 | 4 |
smooth muscle cell | 1.76e-16 | 43 |
smooth muscle myoblast | 1.76e-16 | 43 |
muscle cell | 7.04e-13 | 55 |
muscle precursor cell | 3.29e-12 | 58 |
myoblast | 3.29e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.29e-12 | 58 |
electrically responsive cell | 1.32e-11 | 61 |
electrically active cell | 1.32e-11 | 61 |
smooth muscle cell of the brachiocephalic vasculature | 3.70e-11 | 2 |
mesodermal cell | 4.13e-10 | 121 |
aortic smooth muscle cell | 6.04e-09 | 10 |