FFCP PHASE1:Hg19::chr3:10291055..10291076,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:10291055..10291076,- to FFCP PHASE1:Hg19::chr3:10291055..10291076,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_BC009749_5end | |||
|cluster_id=chr3:10291055..10291076,- | |||
|coexpression_cluster_id=C1915 | |||
|description=CAGE_peak_2_at_BC009749_5end | |||
|id=chr3:10291055..10291076,- | |||
|ontology_enrichment_celltype=CL:0000766!1.28e-20!76;CL:0000738!6.07e-18!140;CL:0000037!1.55e-17!172;CL:0000566!1.55e-17!172;CL:0000763!3.07e-17!112;CL:0000049!3.07e-17!112;CL:0000988!8.19e-17!182;CL:0000557!1.08e-16!71;CL:0002009!2.21e-15!65;CL:0002032!3.00e-15!165;CL:0000837!3.00e-15!165;CL:0000860!5.22e-15!45;CL:0000839!6.60e-15!70;CL:0002057!1.26e-14!42;CL:0002194!3.38e-14!63;CL:0000576!3.38e-14!63;CL:0000040!3.38e-14!63;CL:0000559!3.38e-14!63;CL:0002031!3.46e-13!124;CL:0000034!2.22e-12!444;CL:0002087!2.34e-12!119;CL:0000048!2.74e-12!430;CL:0000723!1.24e-11!436;CL:0000134!1.41e-09!358;CL:0002320!2.64e-09!365;CL:0000012!2.54e-08!682;CL:0000548!1.93e-07!679;CL:0000004!1.93e-07!679;CL:0000255!1.93e-07!679;CL:0000144!3.27e-07!625;CL:0000003!9.00e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-21;33!CL:0002057;1.29e-21;33!CL:0000766;1.22e-15;69!CL:0000576;1.13e-14;48!CL:0000473;1.79e-14;39!CL:0000234;1.79e-14;39!CL:0000094;2.89e-14;8!CL:0000081;5.47e-10;11!CL:0002393;2.38e-09;6!CL:0002397;2.38e-09;6!CL:0000775;3.97e-08;3!CL:0000763;4.90e-08;100!CL:0000226;1.88e-07;3!CL:0000842;1.88e-07;3!CL:0000784;2.00e-07;3!CL:0000738;7.37e-07;136!CL:0002087;7.93e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.08e-31,72;CL:0000763,1.43e-28,108;CL:0000049,1.43e-28,108;CL:0000860,1.58e-28,42;CL:0002057,1.58e-28,42;CL:0000738,1.13e-27,136;CL:0000037,1.27e-27,168;CL:0000988,2.11e-25,177;CL:0000557,2.85e-24,67;CL:0000473,5.86e-24,48;CL:0000234,5.86e-24,48;CL:0002009,4.75e-22,61;CL:0002032,7.16e-22,161;CL:0000837,7.16e-22,161;CL:0000839,4.88e-21,66;CL:0002194,2.65e-19,59;CL:0000576,2.65e-19,59;CL:0000040,2.65e-19,59;CL:0000559,2.65e-19,59;CL:0002031,5.33e-16,120;CL:0002087,6.52e-15,115;CL:0000094,2.64e-14,8;CL:0000034,1.06e-13,441;CL:0000048,1.74e-13,427;CL:0000723,5.08e-13,433;CL:0000134,1.23e-11,354;CL:0002320,4.43e-11,361;CL:0000081,5.13e-10,11;CL:0000219,3.85e-09,386;CL:0000775,4.07e-08,3;CL:0000226,1.84e-07,3;CL:0000842,1.84e-07,3;CL:0000784,2.23e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.45e-21;42!CL:0000049;8.66e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.96e-16!80;UBERON:0001474!5.17e-15!86;UBERON:0002204!6.89e-15!167;UBERON:0002390!1.44e-14!102;UBERON:0003061!1.44e-14!102;UBERON:0002193!1.99e-13!112;UBERON:0004765!2.05e-13!101;UBERON:0001434!2.05e-13!101;UBERON:0002405!1.07e-10!115;UBERON:0002384!1.07e-08!375;UBERON:0003081!3.00e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.68e-22,76;UBERON:0001474,6.46e-21,82;UBERON:0002390,5.50e-20,98;UBERON:0003061,5.50e-20,98;UBERON:0004765,3.33e-18,90;UBERON:0002193,3.58e-17,108;UBERON:0001434,1.60e-16,100;UBERON:0002405,4.16e-16,93;UBERON:0002204,5.23e-15,167;UBERON:0003081,4.29e-11,203;UBERON:0002384,6.93e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0.672325146451775,2.41077811209591,0.730310090387373,0.487932798790507,0.123121058076788,0.408001382488506,0,0.286235987131057,0,0,0.305653622991805,0.164201178899891,0.393553906568396,2.75354993794233,0.383829398097213,3.2511385896376,0.919421224478927,0,0,0,0,1.46800219667424,12.7418943962332,16.8457335874919,11.0675544065084,0,0,0,0.436194716338694,0,0.727752183563449,4.88100977501938,2.46700732813095,3.40677007984614,0.28769239232215,0.512321413058201,1.18241114944293,5.17118521104928,1.93645405075148,4.06279459783025,2.63539275359647,2.45615535052061,1.79778787556068,4.59125838556354,3.53021929783703,1.91801137739712,0,0.199463657621632,0.426224750532694,2.61188314765726,2.26954089876456,1.86846674698672,0.502497330513487,0,1.3031330682307,0.605399502633369,2.20966581592539,3.16462387440884,0.633765858935825,1.27562579979026,1.25795187305026,2.2465726229299,1.80212271409808,0.964353520182481,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,1.68152568894461,0.790152254325231,0.590129310341499,1.17903228824749,1.85041349099558,0.334372990781356,0,0,0,2.78526142212934,0.589211814949674,0.443067789167242,0,0.896639238079726,2.21100890851793,0.657751618414705,0,0,0,0,1.04535523804977,0.453237370790265,0,0,0.506039384039006,0,0,0,0,0,0,0,0.821127996921047,1.00803371612366,0.802320587350522,0.724122019413995,0,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0,1.94653948121054,0.283604451492204,0,0.087834785693126,0.130979075497713,1.45718115317017,0,0.649094787309367,0.174129737299267,0.26591592103773,2.62339686735876,2.28797964312051,2.22874500797739,0,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,21.0848667897701,23.2668158488995,0.436094052142534,0,0,0.264818361626438,0,0.709336764396714,0,1.06748995729705,0.98667019366864,0,0.404132016209064,0.326923806226917,0,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0.352303495931295,0.161872944368132,0.280901613404497,0.61246251376468,0.122834317311768,0,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,1.10825646193673,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.427114777637135,0,0.300091096084402,0,0,0.37223371266318,0,0.194874010322397,0,0.0920498986422993,0.323292113637624,0,0.302256294682921,0,0.773043412653187,0.818238361772504,1.72082757233402,0,0.530119073285941,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0,0.591534000199219,0.505754070234305,0.241011029883482,0.661763836394364,0,0,0.674156540800822,0.784885860501384,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.370353780634118,0.651616610620649,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0.190254152234598,0,1.71697232418975,0.246217006087397,0.234004265139238,0.594524649154913,0,0.16798212819886,0.425325291727159,0.447792613514241,0.871901815541886,0,30.0524575116526,0.264145302039678,1.03664057770386,0.720599767084807,1.51490920111656,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,3.57656445851882,0,0,0,0.514414748524284,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,2.1100756394171,0,0.799783929456456,0,0.502257091432126,0,0.239624855491583,0,2.85273810081437,0.723906533337896,0.410952645100767,0.537182889719687,0.112085143993527,1.57624608161542,1.07813787429759,1.15508732651774,0,0,0,0.167516265334349,0,6.74106321552464,11.966458368161,6.21623270154053,0.12269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,1.44737618286021,6.90285442619574,4.48255742774466,0.606255142892519,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0,0,0,0,1.07946785661859,0.710246901252508,0.328508624055237,2.59627214591811,1.85936605535935,0.120859449591622,0.200506470303285,0.184161977871793,0,0.546273504020151,0,0,0.231046011313244,0,0,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0.457847324091717,0.082509499920588,0.574265537996172,0,0,0.676695028044854,0,0.15350367472613,0.689182862422653,0,0,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0.464845549297286,0.31481234683064,0,1.54016790088044,1.59691809095107,0.869932992075073,0.74129687641568,0.858749320451947,0,0,0,1.02359116524534,0,0.636406495851874,2.35484592059769,0,0.274537029736055,0.353437207037059,1.41527737101321,0,0.842516912477962,0.48763373908959,1.94970791705028,1.05650146756755,0.545999645631943,0.424216295861138,1.13008116620243,0,1.32687795048244,1.75380354101505,0.578775534266688,0,0,0,0,0.430234056612155,0,0,0,0.633322905892992,0.658589785919804,0.379473173765715,0,0.673554789078584,0.670302275535787,0,0,0,0,0,0,0,0,0.569647187174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| ||
|short_description=p2@BC009749 | |||
}} | }} |
Latest revision as of 13:52, 29 July 2015
Short description: | p2@BC009749 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC009749_5end |
Coexpression cluster: | C1915_Mast_CD14_testicular_Eosinophils_Neutrophils_Basophils_Peripheral |
Association with transcript: | 32bp_to_BC009749_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.68e-22 | 76 |
bone element | 6.46e-21 | 82 |
hematopoietic system | 5.50e-20 | 98 |
blood island | 5.50e-20 | 98 |
skeletal element | 3.33e-18 | 90 |
hemolymphoid system | 3.58e-17 | 108 |
skeletal system | 1.60e-16 | 100 |
immune system | 4.16e-16 | 93 |
musculoskeletal system | 5.23e-15 | 167 |
lateral plate mesoderm | 4.29e-11 | 203 |
connective tissue | 6.93e-11 | 371 |