FFCP PHASE1:Hg19::chr3:102878803..102878807,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000365052_5end | |association_with_transcript=0bp_to_ENST00000365052_5end | ||
|cluster_id=chr3:102878803..102878807,+ | |||
|coexpression_cluster_id=C338 | |coexpression_cluster_id=C338 | ||
|description=CAGE_peak_1_at_ENST00000365052_5end | |description=CAGE_peak_1_at_ENST00000365052_5end | ||
|id=chr3:102878803..102878807,+ | |id=chr3:102878803..102878807,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.73e-07!45 | |ontology_enrichment_celltype=CL:0000860!4.73e-07!45 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.93e-09!57;UBERON:0005068!4.93e-09!57;UBERON:0006241!4.93e-09!57;UBERON:0007135!4.93e-09!57;UBERON:0002020!5.02e-09!34;UBERON:0003528!5.02e-09!34;UBERON:0003080!1.34e-08!42;UBERON:0002780!3.43e-08!41;UBERON:0001890!3.43e-08!41;UBERON:0006240!3.43e-08!41;UBERON:0002791!7.00e-08!33;UBERON:0002616!1.34e-07!59;UBERON:0001893!1.40e-07!34;UBERON:0001869!2.30e-07!32 | |ontology_enrichment_uberon=UBERON:0001049!4.93e-09!57;UBERON:0005068!4.93e-09!57;UBERON:0006241!4.93e-09!57;UBERON:0007135!4.93e-09!57;UBERON:0002020!5.02e-09!34;UBERON:0003528!5.02e-09!34;UBERON:0003080!1.34e-08!42;UBERON:0002780!3.43e-08!41;UBERON:0001890!3.43e-08!41;UBERON:0006240!3.43e-08!41;UBERON:0002791!7.00e-08!33;UBERON:0002616!1.34e-07!59;UBERON:0001893!1.40e-07!34;UBERON:0001869!2.30e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.48e-10;34!UBERON:0002020;4.48e-10;34!UBERON:0002791;5.58e-10;32!UBERON:0002619;5.60e-09;22!UBERON:0001869;6.68e-09;32!UBERON:0002780;8.86e-09;41!UBERON:0001890;8.86e-09;41!UBERON:0001893;4.28e-08;34!UBERON:0000073;1.64e-07;53!UBERON:0002616;1.64e-07;53!UBERON:0001950;1.97e-07;20!UBERON:0002420;2.19e-07;9!UBERON:0007245;2.19e-07;9!UBERON:0010009;2.19e-07;9!UBERON:0010011;2.19e-07;9!UBERON:0000454;2.19e-07;9!UBERON:0000956;2.54e-07;25!UBERON:0000203;2.54e-07;25!UBERON:0000125;5.04e-07;9!UBERON:0002308;5.04e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.71e-13,56;UBERON:0005068,3.71e-13,56;UBERON:0006241,3.71e-13,56;UBERON:0007135,3.71e-13,56;UBERON:0003528,2.67e-12,34;UBERON:0002020,2.67e-12,34;UBERON:0000073,2.86e-12,53;UBERON:0002616,2.86e-12,53;UBERON:0002780,1.32e-11,41;UBERON:0001890,1.32e-11,41;UBERON:0003080,1.32e-11,41;UBERON:0006240,1.32e-11,41;UBERON:0002791,4.55e-11,32;UBERON:0001893,5.49e-10,34;UBERON:0001869,9.58e-10,32;UBERON:0001017,3.57e-09,81;UBERON:0002619,5.48e-09,22;UBERON:0001016,1.45e-08,89;UBERON:0000955,2.73e-08,68;UBERON:0006238,2.73e-08,68;UBERON:0002420,1.61e-07,9;UBERON:0007245,1.61e-07,9;UBERON:0010009,1.61e-07,9;UBERON:0010011,1.61e-07,9;UBERON:0000454,1.61e-07,9;UBERON:0002346,1.71e-07,86;UBERON:0001950,2.01e-07,20;UBERON:0000956,2.48e-07,25;UBERON:0000203,2.48e-07,25;UBERON:0000125,4.04e-07,9;UBERON:0002308,4.04e-07,9;UBERON:0003075,4.77e-07,82;UBERON:0007284,4.77e-07,82 | |||
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303233 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|phase1_expression=0,0.642301571672949,0,0,0,0,22.796989035148,0,0.261185628199839,0,0,0,1.05506791291381,0.123766352960047,0,4.03395087871065,0,0,0,0,0.204000691244253,1.25381888591235,0,0.684372125364421,0.87879847716362,1.52826811495903,1.55991119954897,2.12519109546934,0,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,1.00272223735071,2.38711957787437,0.223915474239924,0,0,1.74477886535478,0,0.970336244751265,0.929716147622738,1.6446715520873,0.929119112685311,4.02769349251011,2.81776777182011,0.47296445977717,3.7922024881028,0.645484683583826,1.35426486594342,1.69418105588344,1.63743690034707,0.674170453335254,3.36692281607993,1.28371610830437,1.27867425159808,1.64925650093358,1.39624560335142,0.426224750532694,2.61188314765726,1.13477044938228,1.86846674698672,1.7587406567972,2.60741459210101,0.868755378820466,2.42159801053347,0.368277635987565,0,0.845021145247767,0.850417199860174,0.838634582033504,0,0,0.16072558669708,0,0.59675003159727,1.0959849225878,0,0,0,0,0,0,0,0,5.69212969109448,3.52342313622563,4.96955196562797,0,0,1.05353633910031,0.196709770113833,3.93010762749165,1.64481199199607,0.334372990781356,0,0,11.6896037044747,0.334231370655521,0.589211814949674,0.443067789167242,0,3.45846563259323,4.1618991219161,4.27538551969558,4.42160028457357,0,0.14828656316206,0,3.1360657141493,0.226618685395132,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0.604820229674197,2.40696176205157,3.47578569318718,0,2.01210257911091,0.12786256184353,0,0,1.01392563272577,0,0.973269740605272,0,0.443458794925128,0.614843499851882,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,1.72845348674525,0,0,0,0,8.60234595106124,0.347140501607594,0,2.51699661725944,0.825354125820202,0.417989933073621,0,0,0,0,0,0.732186172644509,0,0,0,0,0.112611480483322,1.53316637465883,0,0.732806975721629,0,0,0,2.48485975847659,0,0.529636723252875,1.14734648299525,0.709336764396714,1.12135520028461,0,0.98667019366864,0,0,0,0,0.576175924479999,0,1.5608003841516,0,1.79338416662161,0.23486899728753,0,0.140450806702248,0,0,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0,0.250237039743928,0,0,0.30648779579902,0.901428353439581,0,1.4351170855109,0,0,1.20036438433761,0,0,0,0,0,0.757301322732344,0,0,0.710019185033229,0,0.169560592310488,0,0,0,0.365921118388786,0.397589304964456,0.116193942869518,0.310983165046111,0.756962552626885,0,3.12899064659632,3.21620469096443,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0.330881918197182,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,3.80265104465493,0,1.18157981336281,8.82926198829301,0.245976877086227,0.171567810298526,0,0,0.502644862058154,0,0,0,0,0,0,0,0.462985512576611,0.570762456703795,9.4824527755113,37.7733911321744,0.246217006087397,0,1.18904929830983,0,0,0,0,0,1.15014803749563,0,0.088048434013226,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,0,0.411309970813294,0,0,0,0,0,0,0,0.845302752556,0,2.08014873822732,0,1.41849132023278,0.532844358032199,0,0,2.46972101034231,0,0,2.37585561880029,0,0,0.99972991182057,0,1.50677127429638,2.10833939483032,0,1.14861935834114,0,0.144781306667579,0.410952645100767,0,0.896681151948218,0.394061520403854,2.15627574859517,2.18183161675572,0,0,2.31986643833309,0,11.4828975297569,2.99602809578873,11.966458368161,3.72973962092432,0.12269149171914,0,0,0.623912584592421,0.892144943985809,0.473107245101804,0.35142424497814,0,15.9185252839189,7.24311499047534,0.664225598535437,0.368738337083406,0.0868836144680828,0,1.37257369524342,0.206768026122887,1.94142780736755,1.38745825144478,0,0,0.604780586659361,0,0.306923946576125,0.841980283299221,0,0,1.60853921143608,0,1.69630663182921,1.9531789784444,0.164254312027618,0,0.232420756919918,0,0.601519410909855,1.47329582297434,0.114814448164607,0.364182336013434,2.49136388422906,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,1.79099803777743,0,0,0,0,0,0,0.27470839445503,0,0,1.30012049207304,0,0.096670718292122,0.616194468458578,0.614014698904518,0.137836572484531,0,1.59518363305651,0.426133137080504,0,0,0.576570202095319,0.382838137483752,0.10115778085555,0.464845549297286,4.09256050879832,0,0,0,0,0,0.429374660225974,0,0,1.71567174531442,0,0.855877976067841,0,1.56989728039846,0,0.274537029736055,0.589062011728432,0,6.34041284692033,0.842516912477962,0,0.974853958525138,0,0,0.989838023675989,1.13008116620243,0,1.32687795048244,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0.845086807596724,0.286822704408103,0,0,0,2.74439925886963,1.97576935775941,0,0.349934720244983,0.0962221127255121,2.01090682660736,0,0,0,0,1.7737206141467,0,0,0,0,0,0,0,0,0,2.7774258493143,2.88743956579008,0.490080431962063,0,0.144269212976445,0.0711418433484141,0.159426272728822,0.399158742865633,0,0.635020748171649,1.62310970137278,0.561594356226918,1.14117339516596,0.783399478865116,0,0.846458889008016,0.481764225311099,0,0,1.03051603426729,0,0,0,0.19538809540204,0,0,0.811367035427949,0,0,0.935702702041099,0.1465081792718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303233 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|short_description=p1@ENST00000365052 | |short_description=p1@ENST00000365052 | ||
}} | }} |
Latest revision as of 13:52, 29 July 2015
Short description: | p1@ENST00000365052 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000365052_5end |
Coexpression cluster: | C338_MCF7_immature_Adipocyte_Smooth_Osteoblast_Neutrophils_acute |
Association with transcript: | 0bp_to_ENST00000365052_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 3.71e-13 | 56 |
neural rod | 3.71e-13 | 56 |
future spinal cord | 3.71e-13 | 56 |
neural keel | 3.71e-13 | 56 |
brain grey matter | 2.67e-12 | 34 |
gray matter | 2.67e-12 | 34 |
regional part of nervous system | 2.86e-12 | 53 |
regional part of brain | 2.86e-12 | 53 |
regional part of forebrain | 1.32e-11 | 41 |
forebrain | 1.32e-11 | 41 |
anterior neural tube | 1.32e-11 | 41 |
future forebrain | 1.32e-11 | 41 |
regional part of telencephalon | 4.55e-11 | 32 |
telencephalon | 5.49e-10 | 34 |
cerebral hemisphere | 9.58e-10 | 32 |
central nervous system | 3.57e-09 | 81 |
regional part of cerebral cortex | 5.48e-09 | 22 |
nervous system | 1.45e-08 | 89 |
brain | 2.73e-08 | 68 |
future brain | 2.73e-08 | 68 |
basal ganglion | 1.61e-07 | 9 |
nuclear complex of neuraxis | 1.61e-07 | 9 |
aggregate regional part of brain | 1.61e-07 | 9 |
collection of basal ganglia | 1.61e-07 | 9 |
cerebral subcortex | 1.61e-07 | 9 |
neurectoderm | 1.71e-07 | 86 |
neocortex | 2.01e-07 | 20 |
cerebral cortex | 2.48e-07 | 25 |
pallium | 2.48e-07 | 25 |
neural nucleus | 4.04e-07 | 9 |
nucleus of brain | 4.04e-07 | 9 |
neural plate | 4.77e-07 | 82 |
presumptive neural plate | 4.77e-07 | 82 |