FFCP PHASE1:Hg19::chr2:98279494..98279517,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:98279494..98279517,+
|short_description=p@chr2:98279494..98279517,+
|description=CAGE_peak_at_chr2:98279494..98279517,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:98279494..98279517,+ | |||
|coexpression_cluster_id=C1351 | |||
|description=CAGE_peak_at_chr2:98279494..98279517,+ | |||
|id=chr2:98279494..98279517,+ | |||
|ontology_enrichment_celltype=CL:0000860!9.88e-24!45;CL:0002057!6.21e-23!42;CL:0000557!1.31e-21!71;CL:0002009!3.01e-21!65;CL:0000766!4.73e-20!76;CL:0002194!1.48e-19!63;CL:0000576!1.48e-19!63;CL:0000040!1.48e-19!63;CL:0000559!1.48e-19!63;CL:0000839!2.12e-19!70;CL:0000738!3.01e-19!140;CL:0002031!4.03e-18!124;CL:0002087!7.40e-18!119;CL:0000048!9.66e-15!430;CL:0000034!2.58e-14!444;CL:0000723!3.08e-14!436;CL:0000988!2.22e-13!182;CL:0000037!3.64e-12!172;CL:0000566!3.64e-12!172;CL:0000134!3.31e-11!358;CL:0002032!4.59e-11!165;CL:0000837!4.59e-11!165;CL:0000763!9.51e-11!112;CL:0000049!9.51e-11!112;CL:0002320!1.17e-10!365;CL:0000219!2.90e-10!390;CL:0002371!3.12e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.61e-41;33!CL:0002057;2.61e-41;33!CL:0000473;3.65e-32;39!CL:0000234;3.65e-32;39!CL:0000576;2.71e-24;48!CL:0000766;4.79e-22;69!CL:0000767;1.41e-13;3!CL:0002087;6.23e-12;104!CL:0001014;1.08e-10;2!CL:0001016;1.08e-10;2!CL:0000763;5.92e-09;100!CL:0000738;2.57e-08;136!CL:0002393;8.93e-08;6!CL:0002397;8.93e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.12e-47,42;CL:0002057,7.12e-47,42;CL:0000473,2.48e-44,48;CL:0000234,2.48e-44,48;CL:0000557,4.03e-42,67;CL:0000766,1.59e-41,72;CL:0002009,7.21e-40,61;CL:0000738,5.89e-39,136;CL:0000839,5.39e-36,66;CL:0002194,2.43e-34,59;CL:0000576,2.43e-34,59;CL:0000040,2.43e-34,59;CL:0000559,2.43e-34,59;CL:0002031,8.08e-33,120;CL:0000763,3.20e-30,108;CL:0000049,3.20e-30,108;CL:0000037,4.86e-30,168;CL:0002087,8.07e-30,115;CL:0000988,4.15e-28,177;CL:0002032,7.70e-28,161;CL:0000837,7.70e-28,161;CL:0000767,1.48e-13,3;CL:0000134,1.03e-11,354;CL:0002320,2.53e-11,361;CL:0001014,1.06e-10,2;CL:0001016,1.06e-10,2;CL:0000034,4.86e-10,441;CL:0000219,6.02e-10,386;CL:0000048,5.47e-09,427;CL:0000723,9.59e-09,433;CL:0000226,8.30e-07,3;CL:0000623,8.30e-07,3;CL:0000842,8.30e-07,3;CL:0000825,8.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-32;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.06e-22!80;UBERON:0001474!2.29e-21!86;UBERON:0004765!1.27e-20!101;UBERON:0001434!1.27e-20!101;UBERON:0002390!3.38e-20!102;UBERON:0003061!3.38e-20!102;UBERON:0002193!6.97e-18!112;UBERON:0002204!4.33e-17!167;UBERON:0002405!6.90e-15!115;UBERON:0002384!5.49e-11!375;UBERON:0003081!1.57e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.65e-42,76;UBERON:0001474,9.46e-39,82;UBERON:0002390,1.92e-36,98;UBERON:0003061,1.92e-36,98;UBERON:0004765,9.63e-35,90;UBERON:0002405,2.04e-33,93;UBERON:0002193,1.93e-32,108;UBERON:0001434,1.26e-30,100;UBERON:0002204,4.89e-17,167;UBERON:0003081,3.59e-15,203;UBERON:0002384,1.22e-11,371;UBERON:0000926,5.29e-08,315;UBERON:0004120,5.29e-08,315;UBERON:0006603,5.29e-08,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,3.14691421479123,1.15148819429164,1.54816123316076,0.919421224478927,0.30120591877825,0,0,0,0.587200878669695,11.6339035791694,8.22232234627581,11.718587018656,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,2.87817521615278,3.09706370895104,0.575384784644301,1.2808035326455,1.89185783910868,4.82643953031266,5.16387746867061,5.41705946377367,0,0.272906150057846,0.898893937780338,4.28517449319264,2.24650318953266,1.27867425159808,0.329851300186716,0.398927315243264,0,4.64334781805734,4.53908179752912,7.4738669879469,1.25624332628372,1.0429658368404,2.17188844705117,5.44859552370032,7.36555271975129,7.91155968602211,0.422510572623884,0,0.838634582033504,0.22465726229299,0.450530678524519,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,7.93027971474155,3.36305137788922,0,0.393419540227666,1.17903228824749,1.02800749499755,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20964045934839,1.60464117470104,0.289648807765598,0,0,0,0.361439152384566,0,0,0.795285947051099,0.973269740605272,0.189069634328136,0,0,0,0,0,0.97364218096405,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,1.71141546463335,0.149448680551801,0,0.485618833104395,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.772921620136887,0.18611685633159,0.168776332241266,0.0974370051611986,0.757301322732344,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,2.57404691653161,0.743155811443641,0,0,0.141775097242386,0,0,0,0,0,1.4512968087854,1.29707958075265,0.37872730027914,0,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0.22001485746285,0.129271715757778,0,0.845302752556,0,0,0,0,1.0656887160644,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0.179060963239896,0,1.77327684181734,0.862510299438069,2.43851768931522,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0.195801157462741,0,0.413536052245775,1.94142780736755,2.24127871387233,0,0,0.604780586659361,0.992431231275107,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.23874448473769,0,0,0,0,0.222617410045812,0.824019371133798,0,0.19924798825107,0,0,0.613612095012929,0.492339221844278,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.494255755786011,0.522109747527277,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,1.65355761355942,0.103688191397247,0,0.330991955875499,0,0,0,0,0.520679215005393,0,0.174118413160805,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.432164393964449,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0.83088067605837,8.99895566206002,16.2498410457169,0,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0.170388021785422,0.226624183040251,0,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0.295710299979268,0,0.899606224327209,0,0,0,0,0.300515217994437,0,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.706756583783524,0,0,0,0,0,0,0,0,0.490696182767533,0,0,0,0.999936979274649,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0.171488009437418,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,3.14691421479123,1.15148819429164,1.54816123316076,0.919421224478927,0.30120591877825,0,0,0,0.587200878669695,11.6339035791694,8.22232234627581,11.718587018656,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,2.87817521615278,3.09706370895104,0.575384784644301,1.2808035326455,1.89185783910868,4.82643953031266,5.16387746867061,5.41705946377367,0,0.272906150057846,0.898893937780338,4.28517449319264,2.24650318953266,1.27867425159808,0.329851300186716,0.398927315243264,0,4.64334781805734,4.53908179752912,7.4738669879469,1.25624332628372,1.0429658368404,2.17188844705117,5.44859552370032,7.36555271975129,7.91155968602211,0.422510572623884,0,0.838634582033504,0.22465726229299,0.450530678524519,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,7.93027971474155,3.36305137788922,0,0.393419540227666,1.17903228824749,1.02800749499755,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20964045934839,1.60464117470104,0.289648807765598,0,0,0,0.361439152384566,0,0,0.795285947051099,0.973269740605272,0.189069634328136,0,0,0,0,0,0.97364218096405,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,1.71141546463335,0.149448680551801,0,0.485618833104395,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.772921620136887,0.18611685633159,0.168776332241266,0.0974370051611986,0.757301322732344,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,2.57404691653161,0.743155811443641,0,0,0.141775097242386,0,0,0,0,0,1.4512968087854,1.29707958075265,0.37872730027914,0,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0.22001485746285,0.129271715757778,0,0.845302752556,0,0,0,0,1.0656887160644,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0.179060963239896,0,1.77327684181734,0.862510299438069,2.43851768931522,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0.195801157462741,0,0.413536052245775,1.94142780736755,2.24127871387233,0,0,0.604780586659361,0.992431231275107,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.23874448473769,0,0,0,0,0.222617410045812,0.824019371133798,0,0.19924798825107,0,0,0.613612095012929,0.492339221844278,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.494255755786011,0.522109747527277,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,1.65355761355942,0.103688191397247,0,0.330991955875499,0,0,0,0,0.520679215005393,0,0.174118413160805,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.432164393964449,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0.83088067605837,8.99895566206002,16.2498410457169,0,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0.170388021785422,0.226624183040251,0,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0.295710299979268,0,0.899606224327209,0,0,0,0,0.300515217994437,0,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.706756583783524,0,0,0,0,0,0,0,0,0.490696182767533,0,0,0,0.999936979274649,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0.171488009437418,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:98279494..98279517,+ | |||
}} | }} |
Latest revision as of 13:27, 29 July 2015
Short description: | p@chr2:98279494..98279517, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:98279494..98279517, + |
Coexpression cluster: | C1351_immature_CD14_CD34_Peripheral_Mast_Basophils_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.65e-42 | 76 |
bone element | 9.46e-39 | 82 |
hematopoietic system | 1.92e-36 | 98 |
blood island | 1.92e-36 | 98 |
skeletal element | 9.63e-35 | 90 |
immune system | 2.04e-33 | 93 |
hemolymphoid system | 1.93e-32 | 108 |
skeletal system | 1.26e-30 | 100 |
musculoskeletal system | 4.89e-17 | 167 |
lateral plate mesoderm | 3.59e-15 | 203 |
connective tissue | 1.22e-11 | 371 |
mesoderm | 5.29e-08 | 315 |
mesoderm-derived structure | 5.29e-08 | 315 |
presumptive mesoderm | 5.29e-08 | 315 |