FFCP PHASE1:Hg19::chr2:96192611..96192622,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=212bp_to_uc002suu.2_5end | |association_with_transcript=212bp_to_uc002suu.2_5end | ||
|cluster_id=chr2:96192611..96192622,+ | |||
|description=CAGE_peak_3_at_uc002suu.2_5end | |description=CAGE_peak_3_at_uc002suu.2_5end | ||
|id=chr2:96192611..96192622,+ | |id=chr2:96192611..96192622,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;9.33e-11;3!CL:0002174;1.09e-08;1!CL:0000228;1.09e-08;1!CL:0002372;1.09e-08;1!CL:0000501;1.09e-08;1!CL:0000056;2.77e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,9.35e-11,3;CL:0000228,1.05e-08,1;CL:0002372,1.05e-08,1;CL:0002174,1.42e-08,1;CL:0000501,1.42e-08,1;CL:0000515,3.34e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.42e-11;3!CL:0000515;2.77e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;1.14e-15;2!DOID:3908;8.65e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.15e-15,2;DOID:3908,8.66e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000119!9.53e-09!312;UBERON:0000483!1.23e-08!309;UBERON:0000475!2.58e-07!365 | |ontology_enrichment_uberon=UBERON:0000119!9.53e-09!312;UBERON:0000483!1.23e-08!309;UBERON:0000475!2.58e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.14e-15;2!UBERON:0002173;1.14e-15;2!UBERON:0002186;1.14e-15;2!UBERON:0002037;7.75e-12;6!UBERON:0004821;9.33e-11;3!UBERON:0007499;9.33e-11;3!UBERON:0003215;9.33e-11;3!UBERON:0010368;9.33e-11;3!UBERON:0009911;9.33e-11;3!UBERON:0002299;9.33e-11;3!UBERON:0006524;9.33e-11;3!UBERON:0008874;9.33e-11;3!UBERON:0002169;9.33e-11;3!UBERON:0004894;9.33e-11;3!UBERON:0009856;2.77e-08;4!UBERON:0002680;4.71e-08;9!UBERON:0001895;4.71e-08;9!UBERON:0002331;1.56e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.15e-15,2;UBERON:0002173,1.15e-15,2;UBERON:0002186,1.15e-15,2;UBERON:0002037,6.83e-12,6;UBERON:0006215,6.83e-12,6;UBERON:0004821,9.35e-11,3;UBERON:0003215,9.35e-11,3;UBERON:0010368,9.35e-11,3;UBERON:0009911,9.35e-11,3;UBERON:0002299,9.35e-11,3;UBERON:0006524,9.35e-11,3;UBERON:0008874,9.35e-11,3;UBERON:0002169,9.35e-11,3;UBERON:0004894,9.35e-11,3;UBERON:0002680,4.34e-08,9;UBERON:0001895,4.34e-08,9;UBERON:0010092,4.34e-08,9;UBERON:0002331,1.49e-07,10;UBERON:0000358,1.49e-07,10;UBERON:0000307,1.49e-07,10;UBERON:0000091,1.49e-07,10;UBERON:0000087,1.49e-07,10;UBERON:0007010,1.49e-07,10;UBERON:0007806,1.49e-07,10;UBERON:0008780,1.49e-07,10;UBERON:0005728,1.49e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0.492484232307152,1.63200552995402,0,0,0.958120975510189,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.850813354476611,1.77383517970051,0.702678285545008,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0,0.529636723252875,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0.23486899728753,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0,0,0,0,0.600182192168805,0,0.257640540045629,0,0.675105328965065,0,0,0.0920498986422993,0,1.06502877754984,0.10075209822764,0.339121184620975,0.57978255948989,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0,0,0.651616610620649,0,1.44331342025273,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0,1.49959486773086,0,0,0,0,0,1.42636905040718,0.289562613335158,0.410952645100767,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.512556597022804,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.366277859273374,0.495056999523528,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0.296964680832639,0,0,0,0.445234820091624,0,0,0,0,0.251932747854276,0,0.369254416383208,0,0.359473404589307,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,1.01701460117107,0,0,0,0.173624994933292,0,0,3.05163472634166,1.10579259931225,0.295547618953547,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0.183195186803725,0,2.04386596391473,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,6.52346483097368,2.34771483998355,2.71497068714184,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0.195551382734803,0.480952921509202,0.213452994739353,0.19980960958213,0.72045208577053,0,0,0,0.248505071130865,0,0.135904206073614,0,0,0,0,0.136905378891993,0,1.28929632425987,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0.422401346077626,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.851940108927109,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0.606596470166591,0,0,0,0.28984205722165,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0.457680136793847,0,0,0,0.318593534327405,0.449803112163605,0.310525913752519,0,0.53168342911599,0.521745061811734,0.300515217994437,3.04644169735036,0,0.181848659202559,0.644463342254931,0,0.398095888698616,0.400027764663154,0,0,0,0,0.428883182749851,1.30497145982606,0,0.231522474323834,0,0.537266523244462,0,0.219284049578707,0.706756583783524,1.3503982678964,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0.80682027481408,0,0,0.327543835020193,0.443568258651136,0,0,0,0.126831620387814,0,0,0,0,0,0,1.00885116665647,0,0,0,0,0.857440047187092,0,0,0.118193840883968,0.333694205676207,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0.17071847709395,0,0,0.354996002191696,0.426067023795788,0,0.4582137370881,0,0,0,0,0.487671699929078,0,0,0,0,0,0.596852325484105,0,0,0.219881033490858,0.301925687133347,0.0771741581079447,0,0,0,0.471353094203252,0,0,0,0,0,0,0.0999411559249289,0,1.05868461514708,0.160482733378337,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0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| 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| ||
|short_description=p3@uc002suu.2 | |short_description=p3@uc002suu.2 | ||
}} | }} |
Latest revision as of 13:14, 29 July 2015
Short description: | p3@uc002suu.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc002suu.2_5end |
Coexpression cluster: | NA |
Association with transcript: | 212bp_to_uc002suu.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 9.35e-11 | 3 |
multinucleate cell | 1.05e-08 | 1 |
myotube | 1.05e-08 | 1 |
follicular cell of ovary | 1.42e-08 | 1 |
granulosa cell | 1.42e-08 | 1 |
skeletal muscle myoblast | 3.34e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.15e-15 | 2 |
alveolar duct | 1.15e-15 | 2 |
bronchiole | 1.15e-15 | 2 |
cerebellum | 6.83e-12 | 6 |
rhombic lip | 6.83e-12 | 6 |
pulmonary alveolus epithelium | 9.35e-11 | 3 |
alveolus | 9.35e-11 | 3 |
pulmonary lobule | 9.35e-11 | 3 |
lobule | 9.35e-11 | 3 |
alveolus of lung | 9.35e-11 | 3 |
alveolar system | 9.35e-11 | 3 |
pulmonary acinus | 9.35e-11 | 3 |
alveolar sac | 9.35e-11 | 3 |
alveolar wall | 9.35e-11 | 3 |
regional part of metencephalon | 4.34e-08 | 9 |
metencephalon | 4.34e-08 | 9 |
future metencephalon | 4.34e-08 | 9 |
umbilical cord | 1.49e-07 | 10 |
blastocyst | 1.49e-07 | 10 |
blastula | 1.49e-07 | 10 |
bilaminar disc | 1.49e-07 | 10 |
inner cell mass | 1.49e-07 | 10 |
cleaving embryo | 1.49e-07 | 10 |
connecting stalk | 1.49e-07 | 10 |
inner cell mass derived epiblast | 1.49e-07 | 10 |
extraembryonic mesoderm | 1.49e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.15e-15 | 2 |
non-small cell lung carcinoma | 8.66e-07 | 5 |