FFCP PHASE1:Hg19::chr2:89161990..89162001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:89161990..89162001,- | |||
|coexpression_cluster_id=C1508 | |||
|description=CAGE_peak_at_chr2:89161990..89162001,- | |description=CAGE_peak_at_chr2:89161990..89162001,- | ||
|id=chr2:89161990..89162001,- | |id=chr2:89161990..89162001,- | ||
|ontology_enrichment_celltype=CL:0000236!2.69e-60!14;CL:0000945!4.70e-41!24;CL:0000826!4.70e-41!24;CL:0000838!2.08e-32!52;CL:0000542!9.72e-32!53;CL:0000051!9.72e-32!53;CL:0000784!6.06e-23!3;CL:0000738!1.09e-18!140;CL:0002087!4.95e-16!119;CL:0000037!1.68e-14!172;CL:0000566!1.68e-14!172;CL:0000988!1.72e-13!182;CL:0002031!1.98e-13!124;CL:0002032!1.28e-10!165;CL:0000837!1.28e-10!165;CL:0000819!3.28e-08!1 | |ontology_enrichment_celltype=CL:0000236!2.69e-60!14;CL:0000945!4.70e-41!24;CL:0000826!4.70e-41!24;CL:0000838!2.08e-32!52;CL:0000542!9.72e-32!53;CL:0000051!9.72e-32!53;CL:0000784!6.06e-23!3;CL:0000738!1.09e-18!140;CL:0002087!4.95e-16!119;CL:0000037!1.68e-14!172;CL:0000566!1.68e-14!172;CL:0000988!1.72e-13!182;CL:0002031!1.98e-13!124;CL:0002032!1.28e-10!165;CL:0000837!1.28e-10!165;CL:0000819!3.28e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.24e-46;3!CL:0000236;1.60e-41;13!CL:0000945;2.25e-30;24!CL:0000542;2.66e-18;53!CL:0000451;3.48e-13;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.25e-46,3;CL:0000236,1.43e-38,14;CL:0000945,2.41e-30,24;CL:0000826,2.41e-30,24;CL:0000838,6.77e-23,52;CL:0000542,1.88e-22,53;CL:0000051,1.88e-22,53;CL:0000738,5.82e-15,136;CL:0000451,3.48e-13,10;CL:0002087,3.17e-12,115;CL:0000037,6.41e-12,168;CL:0002031,1.11e-11,120;CL:0000988,2.94e-11,177;CL:0002032,1.80e-08,161;CL:0000837,1.80e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000051;2.66e-18;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.17e-11!10;DOID:0060060!3.06e-08!1;DOID:0060061!3.06e-08!1;DOID:8691!3.06e-08!1;DOID:0060073!3.28e-08!1;DOID:8675!3.28e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.39e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.66e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!4.82e-10!3;UBERON:0004854!4.82e-10!3;UBERON:0009034!4.82e-10!3;UBERON:0002095!4.82e-10!3;UBERON:0004782!4.82e-10!3;UBERON:0003281!4.82e-10!3;UBERON:0009664!4.82e-10!3;UBERON:0002296!4.82e-10!3;UBERON:0005602!4.82e-10!3;UBERON:0001179!4.82e-10!3;UBERON:0006293!4.82e-10!3;UBERON:0002372!2.29e-08!1;UBERON:0001961!2.29e-08!1;UBERON:0001744!2.29e-08!1;UBERON:0001735!2.29e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr2:89161990..89162001,- | |short_description=p@chr2:89161990..89162001,- | ||
}} | }} |
Latest revision as of 13:05, 29 July 2015
Short description: | p@chr2:89161990..89162001, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:89161990..89162001, - |
Coexpression cluster: | C1508_Dendritic_adult_lymphangiectasia_hairy_CD19_lymphoma_diffuse |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.25e-46 | 3 |
B cell | 1.43e-38 | 14 |
lymphocyte of B lineage | 2.41e-30 | 24 |
pro-B cell | 2.41e-30 | 24 |
lymphoid lineage restricted progenitor cell | 6.77e-23 | 52 |
lymphocyte | 1.88e-22 | 53 |
common lymphoid progenitor | 1.88e-22 | 53 |
leukocyte | 5.82e-15 | 136 |
dendritic cell | 3.48e-13 | 10 |
nongranular leukocyte | 3.17e-12 | 115 |
hematopoietic stem cell | 6.41e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 1.11e-11 | 120 |
hematopoietic cell | 2.94e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.80e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.66e-07 | 10 |