FFCP PHASE1:Hg19::chr2:89157057..89157073,+: Difference between revisions
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|id=chr2:89157057..89157073,+
|short_description=p5@CU688247,p5@CU689025,p5@CU689831,p5@CU689833,p5@CU689835,p5@CU691143
|description=CAGE_peak_5_at_CU688247_5end,CA...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=182bp_to_CU688247,CU689025,CU689831,CU689833,CU689835,CU691143_5end | |||
|cluster_id=chr2:89157057..89157073,+ | |||
|coexpression_cluster_id=C481 | |||
|description=CAGE_peak_5_at_CU688247_5end,CAGE_peak_5_at_CU689025_5end,CAGE_peak_5_at_CU689831_5end,CAGE_peak_5_at_CU689833_5end,CAGE_peak_5_at_CU689835_5end,CAGE_peak_5_at_CU691143_5end | |||
|id=chr2:89157057..89157073,+ | |||
|ontology_enrichment_celltype=CL:0000236!3.77e-30!14;CL:0000945!1.52e-29!24;CL:0000826!1.52e-29!24;CL:0000838!5.98e-13!52;CL:0000542!1.27e-12!53;CL:0000051!1.27e-12!53;CL:0000785!2.61e-07!2;CL:0000955!2.61e-07!2;CL:0000818!2.61e-07!2;CL:0000954!2.61e-07!2;CL:0000816!2.61e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;7.54e-31;13!CL:0000945;1.06e-30;24!CL:0000542;3.74e-08;53!CL:0000946;5.15e-08;1!CL:0000786;5.15e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.12e-36,14;CL:0000945,9.70e-31,24;CL:0000826,9.70e-31,24;CL:0000838,4.06e-13,52;CL:0000542,7.82e-13,53;CL:0000051,7.82e-13,53;CL:0000946,5.70e-08,1;CL:0000786,5.70e-08,1;CL:0000980,5.70e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.43e-08;1!CL:0000051;3.74e-08;53!UBERON:0001045;5.15e-08;1!UBERON:0006595;6.35e-08;86!UBERON:0008801;1.49e-07;1!UBERON:0006242;1.49e-07;1 | |||
|ontology_enrichment_disease=DOID:0060058!2.26e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-29!115;UBERON:0000178!1.40e-08!15;UBERON:0000179!1.40e-08!15;UBERON:0000463!1.40e-08!15;UBERON:0001829!1.58e-07!2;UBERON:0003408!2.87e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;4.77e-14;2!UBERON:0001044;1.96e-10;6!UBERON:0003293;1.96e-10;6!UBERON:0003294;1.96e-10;6!UBERON:0010047;1.96e-10;6!UBERON:0003408;1.96e-10;6!UBERON:0000167;1.96e-10;6!UBERON:0004921;4.30e-10;33!UBERON:0000029;2.70e-08;1!UBERON:0002372;3.43e-08;1!UBERON:0001736;3.43e-08;1!UBERON:0001961;3.43e-08;1!UBERON:0001744;3.43e-08;1!UBERON:0001042;3.43e-08;1!UBERON:0001735;3.43e-08;1!UBERON:0001154;5.15e-08;1!UBERON:0001153;5.15e-08;1!UBERON:0009854;5.15e-08;1!UBERON:0001831;1.49e-07;1!UBERON:0002171;1.49e-07;1!UBERON:0006518;1.49e-07;1!UBERON:0008949;1.49e-07;1!UBERON:0000101;1.49e-07;1!UBERON:0001567;1.49e-07;1!UBERON:0002167;1.49e-07;1!UBERON:0001155;2.86e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.78e-15,114;UBERON:0001829,4.18e-14,2;UBERON:0001044,2.06e-10,6;UBERON:0003293,2.06e-10,6;UBERON:0003294,2.06e-10,6;UBERON:0010047,2.06e-10,6;UBERON:0000167,2.06e-10,6;UBERON:0000029,2.70e-08,1;UBERON:0001736,3.32e-08,1;UBERON:0006298,3.32e-08,1;UBERON:0002372,3.55e-08,1;UBERON:0001961,3.55e-08,1;UBERON:0001744,3.55e-08,1;UBERON:0001735,3.55e-08,1;UBERON:0001154,6.10e-08,1;UBERON:0001153,6.10e-08,1;UBERON:0001045,6.10e-08,1;UBERON:0002171,1.26e-07,1;UBERON:0006518,1.26e-07,1;UBERON:0008949,1.26e-07,1;UBERON:0000101,1.26e-07,1;UBERON:0002167,1.26e-07,1;UBERON:0001831,1.35e-07,1;UBERON:0001567,1.35e-07,1;UBERON:0008801,1.35e-07,1;UBERON:0001155,2.83e-07,9;UBERON:0004921,9.81e-07,118 | |||
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| ||
|short_description=p5@CU688247,p5@CU689025,p5@CU689831,p5@CU689833,p5@CU689835,p5@CU691143 | |||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p5@CU688247, p5@CU689025, p5@CU689831, p5@CU689833, p5@CU689835, p5@CU691143 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CU688247_5end, CAGE_peak_5_at_CU689025_5end, CAGE_peak_5_at_CU689831_5end, CAGE_peak_5_at_CU689833_5end, CAGE_peak_5_at_CU689835_5end, CAGE_peak_5_at_CU691143_5end |
Coexpression cluster: | C481_lymph_vein_tonsil_appendix_submaxillary_trachea_temporal |
Association with transcript: | 182bp_to_CU688247, CU689025, CU689831, CU689833, CU689835, CU691143_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.12e-36 | 14 |
lymphocyte of B lineage | 9.70e-31 | 24 |
pro-B cell | 9.70e-31 | 24 |
lymphoid lineage restricted progenitor cell | 4.06e-13 | 52 |
lymphocyte | 7.82e-13 | 53 |
common lymphoid progenitor | 7.82e-13 | 53 |
antibody secreting cell | 5.70e-08 | 1 |
plasma cell | 5.70e-08 | 1 |
plasmablast | 5.70e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.78e-15 | 114 |
major salivary gland | 4.18e-14 | 2 |
saliva-secreting gland | 2.06e-10 | 6 |
gland of oral region | 2.06e-10 | 6 |
gland of foregut | 2.06e-10 | 6 |
oral gland | 2.06e-10 | 6 |
oral cavity | 2.06e-10 | 6 |
lymph node | 2.70e-08 | 1 |
submandibular gland | 3.32e-08 | 1 |
submandibular gland primordium | 3.32e-08 | 1 |
tonsil | 3.55e-08 | 1 |
mucosa-associated lymphoid tissue | 3.55e-08 | 1 |
lymphoid tissue | 3.55e-08 | 1 |
tonsillar ring | 3.55e-08 | 1 |
vermiform appendix | 6.10e-08 | 1 |
caecum | 6.10e-08 | 1 |
midgut | 6.10e-08 | 1 |
lower lobe of right lung | 1.26e-07 | 1 |
right lung lobe | 1.26e-07 | 1 |
lower lobe of lung | 1.26e-07 | 1 |
lobe of lung | 1.26e-07 | 1 |
right lung | 1.26e-07 | 1 |
parotid gland | 1.35e-07 | 1 |
cheek | 1.35e-07 | 1 |
parotid gland primordium | 1.35e-07 | 1 |
colon | 2.83e-07 | 9 |
subdivision of digestive tract | 9.81e-07 | 118 |