FFCP PHASE1:Hg19::chr2:89156917..89156926,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=267bp_to_AJ294735_5end | |||
|cluster_id=chr2:89156917..89156926,- | |||
|coexpression_cluster_id=C668 | |||
|description=CAGE_peak_7_at_AJ294735_5end | |||
|id=chr2:89156917..89156926,- | |||
|ontology_enrichment_celltype=CL:0000236!2.18e-28!14;CL:0000945!1.28e-27!24;CL:0000826!1.28e-27!24;CL:0000838!4.52e-15!52;CL:0000542!1.08e-14!53;CL:0000051!1.08e-14!53;CL:0002087!1.55e-07!119;CL:0002031!5.14e-07!124;CL:0000785!7.15e-07!2;CL:0000955!7.15e-07!2;CL:0000818!7.15e-07!2;CL:0000954!7.15e-07!2;CL:0000816!7.15e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.18e-34;13!CL:0000945;6.65e-27;24!CL:0000542;5.16e-09;53!CL:0000946;4.84e-07;1!CL:0000786;4.84e-07;1!CL:0000785;7.95e-07;1!CL:0000819;7.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.82e-39,14;CL:0000945,5.85e-27,24;CL:0000826,5.85e-27,24;CL:0000785,4.82e-12,2;CL:0000955,4.82e-12,2;CL:0000818,4.82e-12,2;CL:0000954,4.82e-12,2;CL:0000816,4.82e-12,2;CL:0000838,2.49e-11,52;CL:0000542,4.46e-11,53;CL:0000051,4.46e-11,53;CL:0000817,2.55e-08,3;CL:0000946,5.45e-07,1;CL:0000786,5.45e-07,1;CL:0000980,5.45e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000954;3.32e-12;2!CL:0000051;5.16e-09;53!UBERON:0001045;1.64e-07;1!UBERON:0005754;2.23e-07;1!UBERON:0006298;3.39e-07;1!UBERON:0008801;4.84e-07;1!UBERON:0009143;7.95e-07;1!UBERON:0006242;7.95e-07;1!UBERON:0006595;9.07e-07;86 | |||
|ontology_enrichment_disease=DOID:0060058!1.54e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;7.95e-07;1!DOID:8675;7.95e-07;1 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-32!115;UBERON:0001829!4.10e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.44e-12;2!UBERON:0001044;4.21e-09;6!UBERON:0003293;4.21e-09;6!UBERON:0003294;4.21e-09;6!UBERON:0010047;4.21e-09;6!UBERON:0003408;4.21e-09;6!UBERON:0000167;4.21e-09;6!UBERON:0004921;1.35e-08;33!UBERON:0000029;1.55e-07;1!UBERON:0001154;1.64e-07;1!UBERON:0001153;1.64e-07;1!UBERON:0009854;1.64e-07;1!UBERON:0000998;2.23e-07;1!UBERON:0002171;2.23e-07;1!UBERON:0006868;2.23e-07;1!UBERON:0006518;2.23e-07;1!UBERON:0008949;2.23e-07;1!UBERON:0000101;2.23e-07;1!UBERON:0002167;2.23e-07;1!UBERON:0001736;3.39e-07;1!UBERON:0002372;4.84e-07;1!UBERON:0001831;4.84e-07;1!UBERON:0001961;4.84e-07;1!UBERON:0001744;4.84e-07;1!UBERON:0001042;4.84e-07;1!UBERON:0001567;4.84e-07;1!UBERON:0001735;4.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.92e-16,114;UBERON:0001829,1.62e-12,2;UBERON:0001044,3.92e-09,6;UBERON:0003293,3.92e-09,6;UBERON:0003294,3.92e-09,6;UBERON:0010047,3.92e-09,6;UBERON:0000167,3.92e-09,6;UBERON:0000029,1.55e-07,1;UBERON:0001154,1.65e-07,1;UBERON:0001153,1.65e-07,1;UBERON:0001045,1.65e-07,1;UBERON:0002171,1.86e-07,1;UBERON:0006518,1.86e-07,1;UBERON:0008949,1.86e-07,1;UBERON:0000101,1.86e-07,1;UBERON:0002167,1.86e-07,1;UBERON:0000998,2.67e-07,1;UBERON:0006868,2.67e-07,1;UBERON:0001736,3.60e-07,1;UBERON:0006298,3.60e-07,1;UBERON:0002372,4.85e-07,1;UBERON:0001961,4.85e-07,1;UBERON:0001744,4.85e-07,1;UBERON:0001735,4.85e-07,1;UBERON:0001831,5.14e-07,1;UBERON:0001567,5.14e-07,1;UBERON:0008801,5.14e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309868802321207,0.995184627411951,0,0,0,0,0.223915474239924,1.94336199611388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,4.23779651843358,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,1.63841583378639,4.44754626931777,0.853460445133014,1.60158394814405,3.4485146397269,3.30522436392431,0,5.12291672198504,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,6.63081397274754,0,0,0,0,0,0,0,2.76201535783414,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15425387755696,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,4.24596309616028,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,1.26085721434945,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0.709251365692784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,1.06787412567695,0,4.97086866416635,10.9156524798629,12.2519211776725,4.87170393523584,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,2.19303106742873,0.496211178389294,0,0,0,0,0,0,0,2.18944576355981,0,0,0,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,1.72090943528111,0,0,4.23387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,2.85544384999395,0,0,0,0,0,0,0,0,4.79317981697253,0.128915775947154,0,0,0,0,0,3.21110498383179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0,0,0,3.19850972851471,0,0.193766729508018,0,0,0.190941474834495,0,0.653150243690884,0,2.22261774948139,3.08405483188508,0,0,0,0,0,0,0.122241444182866,0,0,3.22038069745642,0 | |||
|short_description=p7@AJ294735 | |||
}} |
Latest revision as of 13:04, 29 July 2015
Short description: | p7@AJ294735 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AJ294735_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | 267bp_to_AJ294735_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.82e-39 | 14 |
lymphocyte of B lineage | 5.85e-27 | 24 |
pro-B cell | 5.85e-27 | 24 |
mature B cell | 4.82e-12 | 2 |
pre-B-II cell | 4.82e-12 | 2 |
transitional stage B cell | 4.82e-12 | 2 |
small pre-B-II cell | 4.82e-12 | 2 |
immature B cell | 4.82e-12 | 2 |
lymphoid lineage restricted progenitor cell | 2.49e-11 | 52 |
lymphocyte | 4.46e-11 | 53 |
common lymphoid progenitor | 4.46e-11 | 53 |
precursor B cell | 2.55e-08 | 3 |
antibody secreting cell | 5.45e-07 | 1 |
plasma cell | 5.45e-07 | 1 |
plasmablast | 5.45e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.92e-16 | 114 |
major salivary gland | 1.62e-12 | 2 |
saliva-secreting gland | 3.92e-09 | 6 |
gland of oral region | 3.92e-09 | 6 |
gland of foregut | 3.92e-09 | 6 |
oral gland | 3.92e-09 | 6 |
oral cavity | 3.92e-09 | 6 |
lymph node | 1.55e-07 | 1 |
vermiform appendix | 1.65e-07 | 1 |
caecum | 1.65e-07 | 1 |
midgut | 1.65e-07 | 1 |
lower lobe of right lung | 1.86e-07 | 1 |
right lung lobe | 1.86e-07 | 1 |
lower lobe of lung | 1.86e-07 | 1 |
lobe of lung | 1.86e-07 | 1 |
right lung | 1.86e-07 | 1 |
seminal vesicle | 2.67e-07 | 1 |
seminal fluid secreting gland | 2.67e-07 | 1 |
submandibular gland | 3.60e-07 | 1 |
submandibular gland primordium | 3.60e-07 | 1 |
tonsil | 4.85e-07 | 1 |
mucosa-associated lymphoid tissue | 4.85e-07 | 1 |
lymphoid tissue | 4.85e-07 | 1 |
tonsillar ring | 4.85e-07 | 1 |
parotid gland | 5.14e-07 | 1 |
cheek | 5.14e-07 | 1 |
parotid gland primordium | 5.14e-07 | 1 |