FFCP PHASE1:Hg19::chr2:64681575..64681630,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=29094 | |EntrezGene=entrezgene:29094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=25012 | |HGNC=HGNC:25012 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q3ZCW2 | |UniProt=uniprot:Q3ZCW2 | ||
|association_with_transcript=0bp_to_ENST00000238875,ENST00000462737_5end | |association_with_transcript=0bp_to_ENST00000238875,ENST00000462737_5end | ||
|cluster_id=chr2:64681575..64681630,+ | |||
|description=CAGE_peak_4_at_LGALSL_5end | |description=CAGE_peak_4_at_LGALSL_5end | ||
|id=chr2:64681575..64681630,+ | |id=chr2:64681575..64681630,+ |
Revision as of 11:25, 29 July 2015
Short description: | p4@LGALSL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LGALSL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000238875, ENST00000462737_5end |
EntrezGene: | 29094 |
HGNC: | 25012 |
UniProt: | Q3ZCW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@LGALSL |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.24e-24 | 223 |
ectoderm-derived structure | 5.60e-19 | 171 |
ectoderm | 5.60e-19 | 171 |
presumptive ectoderm | 5.60e-19 | 171 |
adult organism | 1.58e-18 | 114 |
nervous system | 1.70e-15 | 89 |
central nervous system | 3.30e-14 | 81 |
ecto-epithelium | 3.67e-14 | 104 |
neurectoderm | 5.68e-14 | 86 |
neural plate | 8.41e-13 | 82 |
Showing 1 to 10 of 45 entries
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.94e-14 | 143 |
carcinoma | 1.29e-11 | 106 |
germ cell and embryonal cancer | 6.44e-07 | 22 |
germ cell cancer | 6.44e-07 | 22 |
Showing 1 to 4 of 4 entries