FFCP PHASE1:Hg19::chr2:56094041..56094058,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:56094041..56094058,- | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56094041..56094058,- | |description=CAGE_peak_at_chr2:56094041..56094058,- | ||
|id=chr2:56094041..56094058,- | |id=chr2:56094041..56094058,- | ||
|ontology_enrichment_celltype=CL:0000222!2.03e-13!119;CL:0002139!2.47e-11!24;CL:0000213!4.74e-11!57;CL:0000215!4.74e-11!57;CL:0000055!5.11e-10!180;CL:0000057!5.23e-10!75;CL:0000071!9.23e-08!18;CL:0002546!9.23e-08!18;CL:0002078!9.32e-08!44;CL:0002494!9.97e-08!16;CL:0000220!1.17e-07!246;CL:0002321!1.98e-07!248;CL:0000115!6.50e-07!35 | |ontology_enrichment_celltype=CL:0000222!2.03e-13!119;CL:0002139!2.47e-11!24;CL:0000213!4.74e-11!57;CL:0000215!4.74e-11!57;CL:0000055!5.11e-10!180;CL:0000057!5.23e-10!75;CL:0000071!9.23e-08!18;CL:0002546!9.23e-08!18;CL:0002078!9.32e-08!44;CL:0002494!9.97e-08!16;CL:0000220!1.17e-07!246;CL:0002321!1.98e-07!248;CL:0000115!6.50e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000153;8.31e-15;9!CL:0000447;8.31e-15;9!CL:0002139;2.45e-13;24!CL:0002078;4.02e-13;45!CL:0000135;2.25e-12;3!CL:0000388;2.25e-12;3!CL:0000138;3.37e-10;6!CL:0002138;3.53e-10;6!CL:0000499;1.88e-09;28!CL:0000213;7.21e-09;58!CL:0000215;7.21e-09;58!CL:0000327;1.38e-08;15!CL:0000115;1.64e-08;36!CL:0002617;7.59e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,5.55e-16,58;CL:0000215,5.55e-16,58;CL:0000153,5.31e-15,9;CL:0000447,5.31e-15,9;CL:0002078,8.08e-15,45;CL:0002139,2.15e-13,24;CL:0000135,1.88e-12,3;CL:0000388,1.88e-12,3;CL:0000058,2.15e-10,6;CL:0000138,2.15e-10,6;CL:0005020,2.94e-10,6;CL:0002138,2.94e-10,6;CL:0005022,2.94e-10,6;CL:0000115,4.61e-10,36;CL:0000499,1.46e-09,28;CL:0000222,4.45e-09,121;CL:0000327,1.07e-08,15;CL:0002617,5.95e-08,2;CL:0000151,8.04e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;3.53e-10;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;9.88e-07;5!DOID:450;9.88e-07;5!DOID:66;9.88e-07;5!DOID:423;9.88e-07;5!DOID:0080000;9.88e-07;5!DOID:11722;9.88e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.86e-07,5;DOID:450,4.86e-07,5;DOID:66,4.86e-07,5;DOID:423,4.86e-07,5;DOID:0080000,4.86e-07,5;DOID:11722,4.86e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!9.75e-17!84;UBERON:0002049!3.43e-16!79;UBERON:0007798!3.43e-16!79;UBERON:0004535!6.56e-16!110;UBERON:0001009!9.58e-16!113;UBERON:0000055!7.61e-15!69;UBERON:0003914!4.55e-13!118;UBERON:0001981!5.74e-13!60;UBERON:0007500!5.74e-13!60;UBERON:0004537!5.74e-13!60;UBERON:0006965!5.74e-13!60;UBERON:0000477!4.94e-10!286;UBERON:0001637!1.15e-09!42;UBERON:0003509!1.15e-09!42;UBERON:0004572!1.15e-09!42;UBERON:0006914!5.08e-09!25;UBERON:0000490!7.61e-09!138;UBERON:0004573!1.24e-08!33;UBERON:0004571!1.24e-08!33;UBERON:0004111!6.15e-08!241;UBERON:0000487!7.32e-08!22;UBERON:0001986!9.23e-08!18;UBERON:0004638!9.23e-08!18;UBERON:0004852!9.23e-08!18;UBERON:0000025!6.17e-07!194;UBERON:0000948!7.21e-07!24;UBERON:0005498!7.21e-07!24;UBERON:0004140!7.21e-07!24;UBERON:0009881!7.21e-07!24;UBERON:0004141!7.21e-07!24;UBERON:0003084!7.21e-07!24;UBERON:0007005!7.21e-07!24;UBERON:0004139!7.21e-07!24;UBERON:0004291!7.21e-07!24 | |ontology_enrichment_uberon=UBERON:0004872!9.75e-17!84;UBERON:0002049!3.43e-16!79;UBERON:0007798!3.43e-16!79;UBERON:0004535!6.56e-16!110;UBERON:0001009!9.58e-16!113;UBERON:0000055!7.61e-15!69;UBERON:0003914!4.55e-13!118;UBERON:0001981!5.74e-13!60;UBERON:0007500!5.74e-13!60;UBERON:0004537!5.74e-13!60;UBERON:0006965!5.74e-13!60;UBERON:0000477!4.94e-10!286;UBERON:0001637!1.15e-09!42;UBERON:0003509!1.15e-09!42;UBERON:0004572!1.15e-09!42;UBERON:0006914!5.08e-09!25;UBERON:0000490!7.61e-09!138;UBERON:0004573!1.24e-08!33;UBERON:0004571!1.24e-08!33;UBERON:0004111!6.15e-08!241;UBERON:0000487!7.32e-08!22;UBERON:0001986!9.23e-08!18;UBERON:0004638!9.23e-08!18;UBERON:0004852!9.23e-08!18;UBERON:0000025!6.17e-07!194;UBERON:0000948!7.21e-07!24;UBERON:0005498!7.21e-07!24;UBERON:0004140!7.21e-07!24;UBERON:0009881!7.21e-07!24;UBERON:0004141!7.21e-07!24;UBERON:0003084!7.21e-07!24;UBERON:0007005!7.21e-07!24;UBERON:0004139!7.21e-07!24;UBERON:0004291!7.21e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.25e-12;3!UBERON:0000043;2.25e-12;3!UBERON:0007845;2.25e-12;3!UBERON:0006914;1.78e-10;25!UBERON:0001473;1.24e-07;8!UBERON:0004536;1.24e-07;8!UBERON:0006558;1.24e-07;8!UBERON:0000487;3.15e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.88e-12,3;UBERON:0000043,1.88e-12,3;UBERON:0007845,1.88e-12,3;UBERON:0006914,1.76e-10,25;UBERON:0000055,1.47e-08,68;UBERON:0001473,1.08e-07,8;UBERON:0004536,1.08e-07,8;UBERON:0006558,1.08e-07,8;UBERON:0000487,3.11e-07,22;UBERON:0002049,4.80e-07,78;UBERON:0007798,4.80e-07,78 | |||
|phase1_expression=1.45342703416445,1.2846031433459,0.845726424575827,0,1.34088328328186,4.36169262050184,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,2.53007406669196,2.50668955317945,6.22840031531542,0,1.94653948121054,0.0945348171640679,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0,0,0,1.10047216776027,0.835979866147242,2.58416759169329,0,0.66944122552934,0.805658634218294,3.80136052859256,3.41686880567437,0.735326160691737,2.43042584364528,1.25019619597712,0.44905874525234,0.450445921933289,0,0,0.732806975721629,0,0,0,1.49091585508596,2.15271869829786,0.662045904066094,3.15520282823695,0.709336764396714,0.560677600142307,2.1349799145941,0.24666754841716,0.311211035399766,0.404132016209064,0.653847612453835,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,1.13432183160021,0.358779271377724,1.70845911054854,1.48352330811693,1.80054657650641,0.103052529238439,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.757301322732344,1.10459878370759,0.484938170456436,0.710019185033229,0.201504196455281,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.514703430895577,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0.234817388471643,1.29929802984966,2.77791307545966,5.51737041480335,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.714889968290738,0,0,0,1.06617584622764,0,0,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,1.24782516918484,0.713715955188647,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.561320188866147,0.896974044789907,0.511707249066704,0.64341568457443,0,0,0,0,0,0,0,0.601519410909855,0,0.34444334449382,0,0.262248829918848,0,0,0,0,0,0,0.340187410553031,1.72732732881711,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0,0.307007349452259,0,0.107420244868274,0,0,0.0890320356467374,0.495854746082934,0.192190067365106,0,0.10115778085555,0,0.94443704049192,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0,0.953150969619124,0,0,0.636406495851874,0,0.359744915166629,0.54907405947211,0.235624804691373,0.404364963146632,0,0.421258456238981,0,0.974853958525138,0,0,0.565621727814851,0,0,1.32687795048244,2.19225442626881,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,6.12212142363226,5.59801318031833,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0.422008249231538,0.111308705022906,0,0,0.996239941255349,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.219385397153973,0,0.557694977114413,0,0.683652335082007,0,0,0,0.957003479195758,0,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.451961481561065,0.959293472527256,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,1.71906176567983,0,0.558564802544508,0,0,0,0.429226048136571,0,0,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,1.25501137532991,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,1.24271716604159,0.992332043623902,0,0,0,0.544017803369474,0,0,0,0,0,0.610131324509816,0,0,0.110929051536852,0,0,0.37494122388632,0,0,0,0,0,0.149254802886874,0.467426619694449,0.554805861502613,1.13641803165053,1.50940741051545,0.889811221596536,0.457680136793847,1.36107831386915,0,0.295710299979268,0.318593534327405,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,1.07220795687463,0,0.226705925512272,0.926089897295336,0.97894681802587,0,4.63202170741458,1.09642024789354,0.353378291891762,0,1.18259708457151,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,3.062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,1.48863353516788,0,1.27762427639595,0,0,0,0,0.0887023701626388,0,1.02892805662451,0,0,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.6828739083758,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0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| ||
|short_description=p@chr2:56094041..56094058,- | |short_description=p@chr2:56094041..56094058,- | ||
}} | }} |
Latest revision as of 10:59, 29 July 2015
Short description: | p@chr2:56094041..56094058, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56094041..56094058, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 5.55e-16 | 58 |
barrier cell | 5.55e-16 | 58 |
GAG secreting cell | 5.31e-15 | 9 |
carbohydrate secreting cell | 5.31e-15 | 9 |
meso-epithelial cell | 8.08e-15 | 45 |
endothelial cell of vascular tree | 2.15e-13 | 24 |
fibrocyte | 1.88e-12 | 3 |
tendon cell | 1.88e-12 | 3 |
chondroblast | 2.15e-10 | 6 |
chondrocyte | 2.15e-10 | 6 |
lymphangioblast | 2.94e-10 | 6 |
endothelial cell of lymphatic vessel | 2.94e-10 | 6 |
vascular lymphangioblast | 2.94e-10 | 6 |
endothelial cell | 4.61e-10 | 36 |
stromal cell | 1.46e-09 | 28 |
mesodermal cell | 4.45e-09 | 121 |
extracellular matrix secreting cell | 1.07e-08 | 15 |
adipocyte of breast | 5.95e-08 | 2 |
secretory cell | 8.04e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.88e-12 | 3 |
tendon | 1.88e-12 | 3 |
regular connective tissue | 1.88e-12 | 3 |
squamous epithelium | 1.76e-10 | 25 |
vessel | 1.47e-08 | 68 |
lymphatic vessel | 1.08e-07 | 8 |
lymph vasculature | 1.08e-07 | 8 |
lymphatic part of lymphoid system | 1.08e-07 | 8 |
simple squamous epithelium | 3.11e-07 | 22 |
vasculature | 4.80e-07 | 78 |
vascular system | 4.80e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.86e-07 | 5 |
myotonic disease | 4.86e-07 | 5 |
muscle tissue disease | 4.86e-07 | 5 |
myopathy | 4.86e-07 | 5 |
muscular disease | 4.86e-07 | 5 |
myotonic dystrophy | 4.86e-07 | 5 |