FFCP PHASE1:Hg19::chr2:46562120..46562166,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:46562120..46562166,+ | |||
|coexpression_cluster_id=C998 | |||
|description=CAGE_peak_at_chr2:46562120..46562166,+ | |description=CAGE_peak_at_chr2:46562120..46562166,+ | ||
|id=chr2:46562120..46562166,+ | |id=chr2:46562120..46562166,+ | ||
|ontology_enrichment_celltype=CL:0002620!2.32e-13!23;CL:0000055!3.33e-12!180;CL:0000057!2.97e-10!75;CL:0000144!7.47e-09!625;CL:0002371!9.55e-09!591;CL:0000723!2.85e-07!436;CL:0002570!3.15e-07!8;CL:0000680!3.34e-07!57;CL:0000056!3.34e-07!57;CL:0000355!3.34e-07!57;CL:0000048!3.68e-07!430;CL:0000192!6.38e-07!42;CL:0000514!6.38e-07!42 | |ontology_enrichment_celltype=CL:0002620!2.32e-13!23;CL:0000055!3.33e-12!180;CL:0000057!2.97e-10!75;CL:0000144!7.47e-09!625;CL:0002371!9.55e-09!591;CL:0000723!2.85e-07!436;CL:0002570!3.15e-07!8;CL:0000680!3.34e-07!57;CL:0000056!3.34e-07!57;CL:0000355!3.34e-07!57;CL:0000048!3.68e-07!430;CL:0000192!6.38e-07!42;CL:0000514!6.38e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000569;6.10e-14;4!CL:0000723;5.40e-12;61!CL:0000134;1.17e-11;55!CL:0000048;3.61e-11;58!CL:0000034;2.91e-10;69!CL:0002328;2.19e-08;3!CL:0002567;2.19e-08;3!CL:0002581;6.68e-07;1!CL:1000306;8.32e-07;4!CL:0002547;8.32e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,7.28e-14,4;CL:0000011,7.28e-14,4;CL:0002328,1.88e-08,3;CL:0002567,1.96e-08,3;CL:0002581,5.78e-07,1;CL:1000306,6.90e-07,4;CL:0002547,6.90e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;6.10e-14;4 | |||
|ontology_enrichment_disease=DOID:2394!1.43e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.78e-32;14!DOID:120;5.91e-16;27!DOID:193;9.45e-15;29!DOID:5662;6.68e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.22e-32,14;DOID:120,5.46e-16,27;DOID:193,8.78e-15,29 | |||
|ontology_enrichment_uberon=UBERON:0002199!4.74e-10!45;UBERON:0002416!4.74e-10!45;UBERON:0002097!6.33e-10!40;UBERON:0000486!8.87e-09!82;UBERON:0002118!1.66e-07!5;UBERON:0004532!1.66e-07!5;UBERON:0004290!4.60e-07!70;UBERON:0000914!5.53e-07!83;UBERON:0002329!5.53e-07!83;UBERON:0003077!5.53e-07!83;UBERON:0003059!5.53e-07!83;UBERON:0007282!5.53e-07!83;UBERON:0009618!5.53e-07!83;UBERON:0007285!5.53e-07!83;UBERON:0003102!7.27e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;2.90e-19;5!UBERON:0000992;9.35e-16;13!UBERON:0000991;1.55e-09;21!UBERON:0004815;2.19e-08;3!UBERON:0002031;2.19e-08;3!UBERON:0004797;8.32e-07;4!UBERON:0000415;8.32e-07;4!UBERON:0007240;8.32e-07;4!UBERON:0005742;8.32e-07;4!UBERON:0005734;8.32e-07;4!UBERON:0004664;8.32e-07;4!UBERON:0004663;8.32e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,2.91e-19,5;UBERON:0000992,9.01e-16,13;UBERON:0000991,1.52e-09,21;UBERON:0009196,1.52e-09,21;UBERON:0009117,1.52e-09,21;UBERON:0005564,1.52e-09,21;UBERON:0004176,4.38e-09,22;UBERON:0004815,1.88e-08,3;UBERON:0002031,1.88e-08,3;UBERON:0000415,6.90e-07,4;UBERON:0007240,6.90e-07,4;UBERON:0005742,6.90e-07,4;UBERON:0005734,6.90e-07,4;UBERON:0004664,6.90e-07,4;UBERON:0004663,6.90e-07,4 | |||
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| ||
|short_description=p@chr2:46562120..46562166,+ | |short_description=p@chr2:46562120..46562166,+ | ||
}} | }} |
Latest revision as of 10:28, 29 July 2015
Short description: | p@chr2:46562120..46562166, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:46562120..46562166, + |
Coexpression cluster: | C998_Fibroblast_Smooth_mesenchymal_Hair_normal_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 7.28e-14 | 4 |
migratory trunk neural crest cell | 7.28e-14 | 4 |
bronchial epithelial cell | 1.88e-08 | 3 |
light melanocyte | 1.96e-08 | 3 |
perirenal preadipocyte | 5.78e-07 | 1 |
fibroblast of tunica adventitia of artery | 6.90e-07 | 4 |
fibroblast of the aortic adventitia | 6.90e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
right ovary | 2.91e-19 | 5 |
female gonad | 9.01e-16 | 13 |
gonad | 1.52e-09 | 21 |
indifferent external genitalia | 1.52e-09 | 21 |
indifferent gonad | 1.52e-09 | 21 |
gonad primordium | 1.52e-09 | 21 |
external genitalia | 4.38e-09 | 22 |
lower respiratory tract epithelium | 1.88e-08 | 3 |
epithelium of bronchus | 1.88e-08 | 3 |
artery wall | 6.90e-07 | 4 |
tunica adventitia of artery | 6.90e-07 | 4 |
adventitia | 6.90e-07 | 4 |
tunica adventitia of blood vessel | 6.90e-07 | 4 |
aorta tunica adventitia | 6.90e-07 | 4 |
aorta wall | 6.90e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.22e-32 | 14 |
female reproductive organ cancer | 5.46e-16 | 27 |
reproductive organ cancer | 8.78e-15 | 29 |