FFCP PHASE1:Hg19::chr2:46229991..46230002,+: Difference between revisions
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|id=chr2:46229991..46230002,+
|short_description=p@chr2:46229991..46230002,+
|description=CAGE_peak_at_chr2:46229991..46230002,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:46229991..46230002,+ | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_at_chr2:46229991..46230002,+ | |||
|id=chr2:46229991..46230002,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.31e-12!4 | |||
|ontology_enrichment_celltype_v019=CL:0000322;8.99e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,9.90e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.44e-09;29!UBERON:0001041;2.84e-09;30!UBERON:0007123;5.70e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000060!6.29e-15!12;UBERON:0001242!3.31e-12!4;UBERON:0001262!3.31e-12!4;UBERON:0004786!3.31e-12!4;UBERON:0004808!3.31e-12!4;UBERON:0001277!3.31e-12!4;UBERON:0000341!1.45e-11!2;UBERON:0005911!9.08e-11!82;UBERON:0003350!7.38e-10!5;UBERON:0003929!1.63e-07!54;UBERON:0004119!1.77e-07!169;UBERON:0000925!1.77e-07!169;UBERON:0006595!1.77e-07!169;UBERON:0009569!7.04e-07!113;UBERON:0002171!7.49e-07!1;UBERON:0006518!7.49e-07!1;UBERON:0008949!7.49e-07!1;UBERON:0000101!7.49e-07!1;UBERON:0002167!7.49e-07!1;UBERON:0000466!8.19e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;7.48e-30;1!UBERON:0006518;7.48e-30;1!UBERON:0008949;7.48e-30;1!UBERON:0000101;7.48e-30;1!UBERON:0002167;7.48e-30;1!UBERON:0002048;3.75e-21;22!UBERON:0000117;3.75e-21;22!UBERON:0000171;3.75e-21;22!UBERON:0000170;3.75e-21;22!UBERON:0000341;2.55e-15;2!UBERON:0005178;1.83e-12;34!UBERON:0002224;1.83e-12;34!UBERON:0004821;8.99e-11;3!UBERON:0007499;8.99e-11;3!UBERON:0003215;8.99e-11;3!UBERON:0010368;8.99e-11;3!UBERON:0009911;8.99e-11;3!UBERON:0002299;8.99e-11;3!UBERON:0006524;8.99e-11;3!UBERON:0008874;8.99e-11;3!UBERON:0002169;8.99e-11;3!UBERON:0004894;8.99e-11;3!UBERON:0005181;1.85e-10;35!UBERON:0000065;3.50e-09;44!UBERON:0009856;2.11e-08;4!UBERON:0002046;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,7.48e-30,1;UBERON:0006518,7.48e-30,1;UBERON:0008949,7.48e-30,1;UBERON:0000101,7.48e-30,1;UBERON:0002167,7.48e-30,1;UBERON:0002048,3.75e-21,22;UBERON:0000117,3.75e-21,22;UBERON:0000171,3.75e-21,22;UBERON:0000170,3.75e-21,22;UBERON:0005597,3.75e-21,22;UBERON:0000118,3.75e-21,22;UBERON:0000341,2.37e-15,2;UBERON:0005178,6.79e-14,34;UBERON:0002224,6.79e-14,34;UBERON:0005181,1.64e-13,35;UBERON:0005153,8.23e-13,37;UBERON:0008947,1.73e-12,38;UBERON:0003258,1.73e-12,38;UBERON:0004821,9.90e-11,3;UBERON:0003215,9.90e-11,3;UBERON:0010368,9.90e-11,3;UBERON:0009911,9.90e-11,3;UBERON:0002299,9.90e-11,3;UBERON:0006524,9.90e-11,3;UBERON:0008874,9.90e-11,3;UBERON:0002169,9.90e-11,3;UBERON:0004894,9.90e-11,3;UBERON:0005157,3.43e-10,47;UBERON:0000915,2.96e-09,52;UBERON:0005911,5.32e-09,82;UBERON:0000065,6.28e-09,54;UBERON:0002046,5.70e-07,5;UBERON:0004117,5.70e-07,5;UBERON:0007689,5.70e-07,5;UBERON:0007123,5.70e-07,5;UBERON:0003091,5.70e-07,5 | |||
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|short_description=p@chr2:46229991..46230002,+ | |||
}} | }} |
Latest revision as of 10:27, 29 July 2015
Short description: | p@chr2:46229991..46230002, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:46229991..46230002, + |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 7.48e-30 | 1 |
right lung lobe | 7.48e-30 | 1 |
lower lobe of lung | 7.48e-30 | 1 |
lobe of lung | 7.48e-30 | 1 |
right lung | 7.48e-30 | 1 |
lung | 3.75e-21 | 22 |
respiratory tube | 3.75e-21 | 22 |
respiration organ | 3.75e-21 | 22 |
pair of lungs | 3.75e-21 | 22 |
lung primordium | 3.75e-21 | 22 |
lung bud | 3.75e-21 | 22 |
throat | 2.37e-15 | 2 |
thoracic cavity element | 6.79e-14 | 34 |
thoracic cavity | 6.79e-14 | 34 |
thoracic segment organ | 1.64e-13 | 35 |
epithelial bud | 8.23e-13 | 37 |
respiratory primordium | 1.73e-12 | 38 |
endoderm of foregut | 1.73e-12 | 38 |
pulmonary alveolus epithelium | 9.90e-11 | 3 |
alveolus | 9.90e-11 | 3 |
pulmonary lobule | 9.90e-11 | 3 |
lobule | 9.90e-11 | 3 |
alveolus of lung | 9.90e-11 | 3 |
alveolar system | 9.90e-11 | 3 |
pulmonary acinus | 9.90e-11 | 3 |
alveolar sac | 9.90e-11 | 3 |
alveolar wall | 9.90e-11 | 3 |
epithelial fold | 3.43e-10 | 47 |
thoracic segment of trunk | 2.96e-09 | 52 |
endo-epithelium | 5.32e-09 | 82 |
respiratory tract | 6.28e-09 | 54 |
thyroid gland | 5.70e-07 | 5 |
pharyngeal pouch | 5.70e-07 | 5 |
thyroid diverticulum | 5.70e-07 | 5 |
pharyngeal pouch 2 | 5.70e-07 | 5 |
thyroid primordium | 5.70e-07 | 5 |