FFCP PHASE1:Hg19::chr2:45233162..45233190,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:45233162..45233190,- to FFCP PHASE1:Hg19::chr2:45233162..45233190,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:45233162..45233190,- | |||
|coexpression_cluster_id=C1906 | |||
|description=CAGE_peak_at_chr2:45233162..45233190,- | |||
|id=chr2:45233162..45233190,- | |||
|ontology_enrichment_celltype=CL:0000499!3.07e-08!27;CL:0000327!4.05e-08!14;CL:0002556!5.86e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000135;8.65e-11;3!CL:0000388;8.65e-11;3!CL:0002623;9.02e-10;3!CL:0000499;1.91e-09;28!CL:0000327;2.37e-09;15!CL:0000153;7.77e-09;9!CL:0000447;7.77e-09;9!CL:0000138;9.09e-09;6!CL:0000151;2.19e-08;36!CL:0002575;3.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,7.54e-11,3;CL:0000388,7.54e-11,3;CL:0002623,6.02e-10,3;CL:0000151,8.77e-10,36;CL:0000499,1.88e-09,28;CL:0000327,2.45e-09,15;CL:0000153,5.99e-09,9;CL:0000447,5.99e-09,9;CL:0000058,6.61e-09,6;CL:0000138,6.61e-09,6;CL:0002575,4.94e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000078!3.22e-08!18;UBERON:0001004!8.77e-08!72;UBERON:0001737!3.21e-07!9;UBERON:0000165!4.21e-07!28;UBERON:0000930!4.21e-07!28;UBERON:0001758!5.86e-07!6;UBERON:0003672!5.86e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;8.65e-11;3!UBERON:0000043;8.65e-11;3!UBERON:0007845;8.65e-11;3!UBERON:0000165;5.43e-09;28!UBERON:0000075;1.76e-08;16!UBERON:0001044;3.17e-08;6!UBERON:0003293;3.17e-08;6!UBERON:0003294;3.17e-08;6!UBERON:0010047;3.17e-08;6!UBERON:0003408;3.17e-08;6!UBERON:0000167;3.17e-08;6!UBERON:0001434;5.25e-08;36!UBERON:0000161;4.64e-07;19!UBERON:0000166;4.64e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,7.54e-11,3;UBERON:0000043,7.54e-11,3;UBERON:0007845,7.54e-11,3;UBERON:0000165,1.04e-10,29;UBERON:0000930,1.04e-10,29;UBERON:0000075,2.05e-08,16;UBERON:0001044,2.78e-08,6;UBERON:0003293,2.78e-08,6;UBERON:0003294,2.78e-08,6;UBERON:0010047,2.78e-08,6;UBERON:0000167,2.78e-08,6;UBERON:0000166,6.64e-08,22;UBERON:0011137,3.26e-07,14 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0.783556884599516,0,0,0,0.263766978228454,0.495065411840187,2.31978163009541,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,2.89151321907653,3.00802746381534,4.92478164466801,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0.49333509683432,0.622422070799533,0.134710672069688,0,0.605429710579726,1.72852777344,0,0,0,0.149448680551801,0.117434498643765,0,0,2.24569588380383,3.4393608847295,2.89312187292143,0,0.494533858557114,0,0,1.5150250255866,0.875829639103749,0.277064115484183,0.877955241761676,1.5324389789951,2.40380894250555,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.591534000199219,1.34867752062481,1.68707720918437,0.992645754591546,0.653638332277218,1.18635309555548,0.269662616320329,0.98110732562673,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,1.10007428731425,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,7.18874566474748,14.9320516584348,0,0.434343920002738,1.64381058040307,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.50051156317903,1.08506009479894,2.28767947683888,4.10386674233472,1.10391690523754,0.117141414992713,0.902838299183157,0,0,0,0.368738337083406,0,1.17480694477644,3.43143423810856,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0,0,0.229628896329213,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,1.94324324491925,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.870036464629098,1.54048617114644,0.307007349452259,0.137836572484531,0.214840489736547,0.435050081742686,0.511359764496605,0.534192213880424,0.495854746082934,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0.272999822815972,0,1.13008116620243,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,4.22215270595328,0.329294892959902,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0,0,1.11136990144637,0,0,1.99613798001194,0,2.62379999988587,0,0.682760689712998,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,1.39423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0.103688191397247,0,0,0,0,0,0,0,0,0.522355239482415,0,0,2.22539561964896,0.803982487948041,0.985385484638511,0,0,0.90392296312213,0.274083849293502,0,0,0.782205530939212,0,0,1.19885765749278,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.858452096273142,0,0,0,0,0,0,0,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0,0.851940108927109,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.553394539744923,0.249960815924213,0,0,3.52898729547258,1.40500471742064,0.144921028610825,0.447764408660622,0,0.554805861502613,0.757612021100357,1.76097531226803,1.77962244319307,0,0.453692771289717,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0.214821114084977,0,0,6.80047199927361,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0.97894681802587,0,0,0,0.176689145945881,0,0.168942440653073,0,3.10887307558079,1.21543982470953,0,0,0,0,0,1.72041036127604,0,0,0,0,0,0.184105950251841,0,0,0.383683113910955,0,0,0.218419276384028,0,0,0,0,0,0,0,15.1650655786994,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.353909170043221,0,0,0.381382095467167,0,3.1826595538604,0,1.21023041222112,0,0,0.163771917510097,0,0,0,0,0,0,0,1.48863353516788,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.236387681767936,0.778619813244484,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0.347716544605159,1.60342272946051,1.86494547746733,3.92652497316085,1.38251932362818,1.29068207646083,0,0,0,0,0,0,0.223710863595585,0,0,0,0.102662806856247,1.1598144313382,0,5.61454712309054,0,0.237840181555137,0,0.109940516745429,1.66059127923341,0,0,7.52507674178437,0,1.88541237681301,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,0,3.71995018166751,5.0839319149456,3.46101249699031,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0.14344441078535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|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0.783556884599516,0,0,0,0.263766978228454,0.495065411840187,2.31978163009541,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,2.89151321907653,3.00802746381534,4.92478164466801,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0.49333509683432,0.622422070799533,0.134710672069688,0,0.605429710579726,1.72852777344,0,0,0,0.149448680551801,0.117434498643765,0,0,2.24569588380383,3.4393608847295,2.89312187292143,0,0.494533858557114,0,0,1.5150250255866,0.875829639103749,0.277064115484183,0.877955241761676,1.5324389789951,2.40380894250555,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.591534000199219,1.34867752062481,1.68707720918437,0.992645754591546,0.653638332277218,1.18635309555548,0.269662616320329,0.98110732562673,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,1.10007428731425,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,7.18874566474748,14.9320516584348,0,0.434343920002738,1.64381058040307,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.50051156317903,1.08506009479894,2.28767947683888,4.10386674233472,1.10391690523754,0.117141414992713,0.902838299183157,0,0,0,0.368738337083406,0,1.17480694477644,3.43143423810856,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0,0,0.229628896329213,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,1.94324324491925,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.870036464629098,1.54048617114644,0.307007349452259,0.137836572484531,0.214840489736547,0.435050081742686,0.511359764496605,0.534192213880424,0.495854746082934,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0.272999822815972,0,1.13008116620243,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,4.22215270595328,0.329294892959902,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0,0,1.11136990144637,0,0,1.99613798001194,0,2.62379999988587,0,0.682760689712998,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,1.39423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0.103688191397247,0,0,0,0,0,0,0,0,0.522355239482415,0,0,2.22539561964896,0.803982487948041,0.985385484638511,0,0,0.90392296312213,0.274083849293502,0,0,0.782205530939212,0,0,1.19885765749278,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.858452096273142,0,0,0,0,0,0,0,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0,0.851940108927109,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.553394539744923,0.249960815924213,0,0,3.52898729547258,1.40500471742064,0.144921028610825,0.447764408660622,0,0.554805861502613,0.757612021100357,1.76097531226803,1.77962244319307,0,0.453692771289717,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0.214821114084977,0,0,6.80047199927361,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0.97894681802587,0,0,0,0.176689145945881,0,0.168942440653073,0,3.10887307558079,1.21543982470953,0,0,0,0,0,1.72041036127604,0,0,0,0,0,0.184105950251841,0,0,0.383683113910955,0,0,0.218419276384028,0,0,0,0,0,0,0,15.1650655786994,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.353909170043221,0,0,0.381382095467167,0,3.1826595538604,0,1.21023041222112,0,0,0.163771917510097,0,0,0,0,0,0,0,1.48863353516788,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.236387681767936,0.778619813244484,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0.347716544605159,1.60342272946051,1.86494547746733,3.92652497316085,1.38251932362818,1.29068207646083,0,0,0,0,0,0,0.223710863595585,0,0,0,0.102662806856247,1.1598144313382,0,5.61454712309054,0,0.237840181555137,0,0.109940516745429,1.66059127923341,0,0,7.52507674178437,0,1.88541237681301,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,0,3.71995018166751,5.0839319149456,3.46101249699031,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0.14344441078535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| ||
|short_description=p@chr2:45233162..45233190,- | |||
}} | }} |
Latest revision as of 10:25, 29 July 2015
Short description: | p@chr2:45233162..45233190, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:45233162..45233190, - |
Coexpression cluster: | C1906_Multipotent_small_normal_Fibroblast_smallcell_breast_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 7.54e-11 | 3 |
tendon cell | 7.54e-11 | 3 |
acinar cell of salivary gland | 6.02e-10 | 3 |
secretory cell | 8.77e-10 | 36 |
stromal cell | 1.88e-09 | 28 |
extracellular matrix secreting cell | 2.45e-09 | 15 |
GAG secreting cell | 5.99e-09 | 9 |
carbohydrate secreting cell | 5.99e-09 | 9 |
chondroblast | 6.61e-09 | 6 |
chondrocyte | 6.61e-09 | 6 |
central nervous system pericyte | 4.94e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 7.54e-11 | 3 |
tendon | 7.54e-11 | 3 |
regular connective tissue | 7.54e-11 | 3 |
mouth | 1.04e-10 | 29 |
stomodeum | 1.04e-10 | 29 |
subdivision of skeletal system | 2.05e-08 | 16 |
saliva-secreting gland | 2.78e-08 | 6 |
gland of oral region | 2.78e-08 | 6 |
gland of foregut | 2.78e-08 | 6 |
oral gland | 2.78e-08 | 6 |
oral cavity | 2.78e-08 | 6 |
oral opening | 6.64e-08 | 22 |
axial skeletal system | 3.26e-07 | 14 |