FFCP PHASE1:Hg19::chr2:45162900..45162914,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-117bp_to_ENST00000432125_5end | |association_with_transcript=-117bp_to_ENST00000432125_5end | ||
|cluster_id=chr2:45162900..45162914,- | |||
|coexpression_cluster_id=C369 | |coexpression_cluster_id=C369 | ||
|description=CAGE_peak_1_at_ENST00000432125_5end | |description=CAGE_peak_1_at_ENST00000432125_5end | ||
Latest revision as of 10:22, 29 July 2015
| Short description: | p1@ENST00000432125 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ENST00000432125_5end |
| Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
| Association with transcript: | -117bp_to_ENST00000432125_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@ENST00000432125 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ciliated cell | 2.93e-40 | 3 |
| ciliated epithelial cell | 2.93e-40 | 3 |
| multi-ciliated epithelial cell | 2.93e-40 | 3 |
| non-pigmented ciliary epithelial cell | 2.93e-40 | 3 |
| retinal pigment epithelial cell | 3.83e-40 | 3 |
| visual pigment cell | 2.59e-30 | 4 |
| columnar/cuboidal epithelial cell | 1.65e-23 | 27 |
| pigment cell | 2.10e-23 | 14 |
| neurecto-epithelial cell | 1.96e-16 | 20 |
| crystallin accumulating cell | 1.51e-14 | 4 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| pigment epithelium of eye | 3.36e-76 | 11 |
| eye | 7.47e-62 | 21 |
| visual system | 7.47e-62 | 21 |
| sense organ | 5.10e-54 | 24 |
| sensory system | 5.10e-54 | 24 |
| entire sense organ system | 5.10e-54 | 24 |
| camera-type eye | 1.02e-52 | 20 |
| simple eye | 1.02e-52 | 20 |
| immature eye | 1.02e-52 | 20 |
| ocular region | 1.02e-52 | 20 |
Showing 1 to 10 of 50 entries
