FFCP PHASE1:Hg19::chr2:38297628..38297658,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:38297628..38297658,- | |||
|coexpression_cluster_id=C667 | |||
|description=CAGE_peak_at_chr2:38297628..38297658,- | |description=CAGE_peak_at_chr2:38297628..38297658,- | ||
|id=chr2:38297628..38297658,- | |id=chr2:38297628..38297658,- | ||
|ontology_enrichment_celltype=CL:0002194!2.17e-18!63;CL:0000576!2.17e-18!63;CL:0000040!2.17e-18!63;CL:0000559!2.17e-18!63;CL:0002057!1.10e-17!42;CL:0002009!2.29e-17!65;CL:0000839!3.99e-16!70;CL:0000860!1.02e-15!45;CL:0000557!1.09e-15!71;CL:0000766!1.06e-13!76;CL:0000763!8.90e-08!112;CL:0000049!8.90e-08!112;CL:0002320!6.62e-07!365;CL:0000048!9.03e-07!430 | |ontology_enrichment_celltype=CL:0002194!2.17e-18!63;CL:0000576!2.17e-18!63;CL:0000040!2.17e-18!63;CL:0000559!2.17e-18!63;CL:0002057!1.10e-17!42;CL:0002009!2.29e-17!65;CL:0000839!3.99e-16!70;CL:0000860!1.02e-15!45;CL:0000557!1.09e-15!71;CL:0000766!1.06e-13!76;CL:0000763!8.90e-08!112;CL:0000049!8.90e-08!112;CL:0002320!6.62e-07!365;CL:0000048!9.03e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.13e-47;33!CL:0002057;4.13e-47;33!CL:0000473;8.00e-42;39!CL:0000234;8.00e-42;39!CL:0000576;1.06e-21;48!CL:0000766;8.36e-13;69!CL:0000135;2.50e-11;3!CL:0000388;2.50e-11;3!CL:0002579;6.44e-11;3!CL:0000763;4.61e-08;100!CL:0002617;1.63e-07;2!CL:0002334;6.38e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.12e-42,48;CL:0000234,2.12e-42,48;CL:0000860,1.27e-38,42;CL:0002057,1.27e-38,42;CL:0002194,3.38e-35,59;CL:0000576,3.38e-35,59;CL:0000040,3.38e-35,59;CL:0000559,3.38e-35,59;CL:0002009,7.87e-34,61;CL:0000839,9.04e-31,66;CL:0000557,3.26e-30,67;CL:0000766,1.18e-27,72;CL:0000763,1.12e-17,108;CL:0000049,1.12e-17,108;CL:0002087,7.92e-15,115;CL:0002031,6.16e-14,120;CL:0000134,3.83e-12,354;CL:0002320,1.08e-11,361;CL:0000738,1.55e-11,136;CL:0000135,1.78e-11,3;CL:0000388,1.78e-11,3;CL:0002579,8.67e-11,3;CL:0000048,2.82e-10,427;CL:0000219,4.12e-10,386;CL:0000723,5.66e-10,433;CL:0002032,1.20e-09,161;CL:0000837,1.20e-09,161;CL:0000034,1.39e-09,441;CL:0000988,5.55e-09,177;CL:0000037,5.60e-09,168;CL:0002617,2.07e-07,2;CL:0002334,7.21e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-29;42!CL:0000049;2.79e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!5.64e-17!101;UBERON:0001434!5.64e-17!101;UBERON:0002371!8.07e-16!80;UBERON:0002204!9.61e-16!167;UBERON:0001474!2.14e-15!86;UBERON:0002390!1.98e-11!102;UBERON:0003061!1.98e-11!102;UBERON:0002193!1.07e-09!112;UBERON:0002405!1.62e-08!115;UBERON:0002384!2.14e-07!375;UBERON:0000062!6.50e-07!511;UBERON:0003688!7.22e-07!6;UBERON:0002358!7.22e-07!6;UBERON:0003684!7.22e-07!6;UBERON:0001178!7.22e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.43e-17;9!UBERON:0000042;1.43e-17;9!UBERON:0003688;6.78e-14;6!UBERON:0002358;6.78e-14;6!UBERON:0003684;6.78e-14;6!UBERON:0001178;6.78e-14;6!UBERON:0007846;2.50e-11;3!UBERON:0000043;2.50e-11;3!UBERON:0007845;2.50e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.61e-28,76;UBERON:0001474,1.06e-27,82;UBERON:0001434,3.81e-25,100;UBERON:0004765,1.34e-24,90;UBERON:0002405,1.15e-21,93;UBERON:0002390,3.31e-20,98;UBERON:0003061,3.31e-20,98;UBERON:0002204,3.30e-19,167;UBERON:0002193,1.07e-17,108;UBERON:0003688,2.13e-13,6;UBERON:0002358,2.13e-13,6;UBERON:0003684,2.13e-13,6;UBERON:0001178,2.13e-13,6;UBERON:0004457,9.48e-13,12;UBERON:0000042,9.48e-13,12;UBERON:0002384,1.07e-12,371;UBERON:0007846,1.78e-11,3;UBERON:0000043,1.78e-11,3;UBERON:0007845,1.78e-11,3;UBERON:0003081,1.47e-08,203;UBERON:0000926,1.58e-08,315;UBERON:0004120,1.58e-08,315;UBERON:0006603,1.58e-08,315 | |||
|phase1_expression=1.45342703416445,1.2846031433459,1.12763523276777,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.447830948479849,0,0.515151135268373,3.34415949192999,1.13362783106643,0.970336244751265,2.78914844286822,3.28934310417461,2.78735733805593,5.17846306179871,10.5025889676931,1.41889337933151,0.689491361473237,0,1.35426486594342,1.88242339542605,1.63743690034707,0.449446968890169,1.22433556948361,0.962787081228281,1.91801137739712,4.28806690242731,13.7629923758926,5.54092175692502,2.32167390902867,1.70215567407342,1.86846674698672,9.04495194924276,9.38669253156363,1.73751075764093,1.81619850790011,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,1.44575660953827,0,1.30361867064741,0,0,0.567208902984407,1.77383517970051,0.527008714158756,0.196468613246569,0,0,0.324547393654683,1.21890816109487,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,0,0.573673241497627,0,0.560677600142307,0,0,0,0,0,0.605429710579726,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.612975591598039,0.300476117813194,0,0,0.640672166455702,0.211931901159562,0,0.206105058476878,0,0,0.337552664482532,0.0974370051611986,0.504867548488229,0.276149695926898,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,1.40402559083543,0.743155811443641,0,0,0,0.0895585227028483,0,0,0,0.616339038092582,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.904318131178758,0,1.09970290300263,1.2162378064119,1.00451418286425,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,0.460385919864187,2.24528075546459,1.15325234330131,1.53512174720011,4.18220194973379,0,0,0.355123450626254,0,0,0,0,0,0,0.114814448164607,0.546273504020151,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0.137836572484531,0.537101224341368,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,1.48863347743867,0.316379424718726,0.762520775695299,0.255897791311334,2.1396949401696,0,0,0,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0.6196469961995,0,0,0.0982490410131212,0,0,1.89996871767898,2.96365403663912,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59663497146253,0.383010740264733,0.211673582723883,0,0.842391534340376,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0.884612114798832,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,1.75996244461323,0.320635281006135,0,0,0,0,0,0.432164393964449,0,0,0,0.104602846312333,0,0.577901179803038,0,0.547621515567972,0,0,0,0.558564802544508,0,6.46085722119133,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.35857467866569,0,0,0.662091970365432,0,0,0,0,0,0,1.5334921960688,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.76097531226803,0.889811221596536,0,0.151230923763239,0.15543720058278,0.295710299979268,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0.657852148736121,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46873160583479,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0.115525666150338,0,0,0.198916222116275,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0.171488009437418,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0.431855182437243,0.47775168788705,0.285906176706625,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0.17042680951831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| |phase1_expression=1.45342703416445,1.2846031433459,1.12763523276777,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.447830948479849,0,0.515151135268373,3.34415949192999,1.13362783106643,0.970336244751265,2.78914844286822,3.28934310417461,2.78735733805593,5.17846306179871,10.5025889676931,1.41889337933151,0.689491361473237,0,1.35426486594342,1.88242339542605,1.63743690034707,0.449446968890169,1.22433556948361,0.962787081228281,1.91801137739712,4.28806690242731,13.7629923758926,5.54092175692502,2.32167390902867,1.70215567407342,1.86846674698672,9.04495194924276,9.38669253156363,1.73751075764093,1.81619850790011,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,1.44575660953827,0,1.30361867064741,0,0,0.567208902984407,1.77383517970051,0.527008714158756,0.196468613246569,0,0,0.324547393654683,1.21890816109487,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,0,0.573673241497627,0,0.560677600142307,0,0,0,0,0,0.605429710579726,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.612975591598039,0.300476117813194,0,0,0.640672166455702,0.211931901159562,0,0.206105058476878,0,0,0.337552664482532,0.0974370051611986,0.504867548488229,0.276149695926898,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,1.40402559083543,0.743155811443641,0,0,0,0.0895585227028483,0,0,0,0.616339038092582,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.904318131178758,0,1.09970290300263,1.2162378064119,1.00451418286425,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,0.460385919864187,2.24528075546459,1.15325234330131,1.53512174720011,4.18220194973379,0,0,0.355123450626254,0,0,0,0,0,0,0.114814448164607,0.546273504020151,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0.137836572484531,0.537101224341368,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,1.48863347743867,0.316379424718726,0.762520775695299,0.255897791311334,2.1396949401696,0,0,0,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0.6196469961995,0,0,0.0982490410131212,0,0,1.89996871767898,2.96365403663912,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59663497146253,0.383010740264733,0.211673582723883,0,0.842391534340376,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0.884612114798832,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,1.75996244461323,0.320635281006135,0,0,0,0,0,0.432164393964449,0,0,0,0.104602846312333,0,0.577901179803038,0,0.547621515567972,0,0,0,0.558564802544508,0,6.46085722119133,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.35857467866569,0,0,0.662091970365432,0,0,0,0,0,0,1.5334921960688,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.76097531226803,0.889811221596536,0,0.151230923763239,0.15543720058278,0.295710299979268,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0.657852148736121,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46873160583479,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0.115525666150338,0,0,0.198916222116275,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0.171488009437418,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0.431855182437243,0.47775168788705,0.285906176706625,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0.17042680951831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| ||
|short_description=p@chr2:38297628..38297658,- | |short_description=p@chr2:38297628..38297658,- | ||
}} | }} |
Latest revision as of 09:57, 29 July 2015
Short description: | p@chr2:38297628..38297658, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:38297628..38297658, - |
Coexpression cluster: | C667_CD14_tenocyte_Synoviocyte_Smooth_dura_Preadipocyte_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.61e-28 | 76 |
bone element | 1.06e-27 | 82 |
skeletal system | 3.81e-25 | 100 |
skeletal element | 1.34e-24 | 90 |
immune system | 1.15e-21 | 93 |
hematopoietic system | 3.31e-20 | 98 |
blood island | 3.31e-20 | 98 |
musculoskeletal system | 3.30e-19 | 167 |
hemolymphoid system | 1.07e-17 | 108 |
omentum | 2.13e-13 | 6 |
peritoneum | 2.13e-13 | 6 |
abdominal cavity | 2.13e-13 | 6 |
visceral peritoneum | 2.13e-13 | 6 |
cavity lining | 9.48e-13 | 12 |
serous membrane | 9.48e-13 | 12 |
connective tissue | 1.07e-12 | 371 |
dense regular connective tissue | 1.78e-11 | 3 |
tendon | 1.78e-11 | 3 |
regular connective tissue | 1.78e-11 | 3 |
lateral plate mesoderm | 1.47e-08 | 203 |
mesoderm | 1.58e-08 | 315 |
mesoderm-derived structure | 1.58e-08 | 315 |
presumptive mesoderm | 1.58e-08 | 315 |