FFCP PHASE1:Hg19::chr2:37938667..37938670,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:37938667..37938670,- | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr2:37938667..37938670,- | |description=CAGE_peak_at_chr2:37938667..37938670,- | ||
|id=chr2:37938667..37938670,- | |id=chr2:37938667..37938670,- | ||
|ontology_enrichment_celltype=CL:0000055!1.55e-26!180;CL:0002620!8.24e-26!23;CL:0000057!3.18e-17!75;CL:0000680!1.12e-11!57;CL:0000056!1.12e-11!57;CL:0000355!1.12e-11!57;CL:0000192!2.22e-10!42;CL:0000514!2.22e-10!42;CL:0000187!7.26e-09!54;CL:0000359!1.09e-08!32;CL:0000393!2.36e-08!60;CL:0000211!2.36e-08!60;CL:0002551!8.14e-08!6;CL:0000183!1.10e-07!59;CL:0000548!5.22e-07!679;CL:0000004!5.22e-07!679;CL:0000255!5.22e-07!679;CL:0000012!7.28e-07!682 | |ontology_enrichment_celltype=CL:0000055!1.55e-26!180;CL:0002620!8.24e-26!23;CL:0000057!3.18e-17!75;CL:0000680!1.12e-11!57;CL:0000056!1.12e-11!57;CL:0000355!1.12e-11!57;CL:0000192!2.22e-10!42;CL:0000514!2.22e-10!42;CL:0000187!7.26e-09!54;CL:0000359!1.09e-08!32;CL:0000393!2.36e-08!60;CL:0000211!2.36e-08!60;CL:0002551!8.14e-08!6;CL:0000183!1.10e-07!59;CL:0000548!5.22e-07!679;CL:0000004!5.22e-07!679;CL:0000255!5.22e-07!679;CL:0000012!7.28e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002539;1.40e-18;10!CL:0002554;3.52e-11;2!CL:0002367;3.52e-11;2!CL:0000359;4.22e-10;32!CL:0002541;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,1.28e-18,10;CL:0002554,2.73e-11,2;CL:0002367,4.09e-11,2;CL:0000359,2.67e-10,32;CL:0002541,7.26e-08,3;CL:0000192,9.57e-08,43;CL:0000514,9.57e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.71e-07!5;DOID:450!9.71e-07!5;DOID:66!9.71e-07!5;DOID:423!9.71e-07!5;DOID:0080000!9.71e-07!5;DOID:11722!9.71e-07!5 | |ontology_enrichment_disease=DOID:17!9.71e-07!5;DOID:450!9.71e-07!5;DOID:66!9.71e-07!5;DOID:423!9.71e-07!5;DOID:0080000!9.71e-07!5;DOID:11722!9.71e-07!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.64e-14!83;UBERON:0002329!1.64e-14!83;UBERON:0003077!1.64e-14!83;UBERON:0003059!1.64e-14!83;UBERON:0007282!1.64e-14!83;UBERON:0009618!1.64e-14!83;UBERON:0007285!1.64e-14!83;UBERON:0002097!5.11e-14!40;UBERON:0004290!1.03e-13!70;UBERON:0002199!3.74e-13!45;UBERON:0002416!3.74e-13!45;UBERON:0000486!1.90e-11!82;UBERON:0001134!1.69e-10!61;UBERON:0002036!1.69e-10!61;UBERON:0003082!1.69e-10!61;UBERON:0002385!5.72e-10!63;UBERON:0001015!5.72e-10!63;UBERON:0000383!5.72e-10!63;UBERON:0003102!1.17e-08!95 | |ontology_enrichment_uberon=UBERON:0000914!1.64e-14!83;UBERON:0002329!1.64e-14!83;UBERON:0003077!1.64e-14!83;UBERON:0003059!1.64e-14!83;UBERON:0007282!1.64e-14!83;UBERON:0009618!1.64e-14!83;UBERON:0007285!1.64e-14!83;UBERON:0002097!5.11e-14!40;UBERON:0004290!1.03e-13!70;UBERON:0002199!3.74e-13!45;UBERON:0002416!3.74e-13!45;UBERON:0000486!1.90e-11!82;UBERON:0001134!1.69e-10!61;UBERON:0002036!1.69e-10!61;UBERON:0003082!1.69e-10!61;UBERON:0002385!5.72e-10!63;UBERON:0001015!5.72e-10!63;UBERON:0000383!5.72e-10!63;UBERON:0003102!1.17e-08!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.40e-18;10!UBERON:0004695;1.40e-18;10!UBERON:0002111;1.40e-18;10!UBERON:0004178;1.40e-18;10!UBERON:0000947;1.29e-15;21!UBERON:0010191;1.29e-15;21!UBERON:0001135;1.27e-12;15!UBERON:0005969;3.52e-11;2!UBERON:0003956;3.52e-11;2!UBERON:0004573;3.64e-10;33!UBERON:0004571;3.64e-10;33!UBERON:0003124;7.02e-08;3!UBERON:0000920;7.02e-08;3!UBERON:0001637;8.83e-08;42!UBERON:0003509;8.83e-08;42!UBERON:0004572;8.83e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.28e-18,10;UBERON:0004695,1.28e-18,10;UBERON:0002111,1.28e-18,10;UBERON:0004178,1.28e-18,10;UBERON:0000947,1.22e-15,21;UBERON:0010191,1.22e-15,21;UBERON:0001135,1.20e-12,15;UBERON:0002049,2.97e-12,78;UBERON:0007798,2.97e-12,78;UBERON:0001637,5.37e-12,42;UBERON:0003509,5.37e-12,42;UBERON:0004572,5.37e-12,42;UBERON:0004535,2.48e-11,109;UBERON:0005969,4.09e-11,2;UBERON:0003956,4.09e-11,2;UBERON:0001009,5.12e-11,112;UBERON:0000055,1.78e-10,68;UBERON:0004573,4.32e-10,33;UBERON:0004571,4.32e-10,33;UBERON:0004872,1.42e-08,83;UBERON:0007500,1.44e-08,59;UBERON:0001981,1.44e-08,59;UBERON:0004537,1.44e-08,59;UBERON:0006965,1.44e-08,59;UBERON:0000920,7.26e-08,3 | |||
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| ||
|short_description=p@chr2:37938667..37938670,- | |short_description=p@chr2:37938667..37938670,- | ||
}} | }} |
Latest revision as of 09:56, 29 July 2015
Short description: | p@chr2:37938667..37938670, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:37938667..37938670, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 1.28e-18 | 10 |
fibroblast of lymphatic vessel | 2.73e-11 | 2 |
trabecular meshwork cell | 4.09e-11 | 2 |
vascular associated smooth muscle cell | 2.67e-10 | 32 |
chorionic membrane mesenchymal stem cell | 7.26e-08 | 3 |
smooth muscle cell | 9.57e-08 | 43 |
smooth muscle myoblast | 9.57e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 1.28e-18 | 10 |
arterial system smooth muscle | 1.28e-18 | 10 |
artery smooth muscle tissue | 1.28e-18 | 10 |
aorta smooth muscle tissue | 1.28e-18 | 10 |
aorta | 1.22e-15 | 21 |
aortic system | 1.22e-15 | 21 |
smooth muscle tissue | 1.20e-12 | 15 |
vasculature | 2.97e-12 | 78 |
vascular system | 2.97e-12 | 78 |
artery | 5.37e-12 | 42 |
arterial blood vessel | 5.37e-12 | 42 |
arterial system | 5.37e-12 | 42 |
cardiovascular system | 2.48e-11 | 109 |
reticulum trabeculare | 4.09e-11 | 2 |
aqueous drainage system | 4.09e-11 | 2 |
circulatory system | 5.12e-11 | 112 |
vessel | 1.78e-10 | 68 |
systemic artery | 4.32e-10 | 33 |
systemic arterial system | 4.32e-10 | 33 |
splanchnic layer of lateral plate mesoderm | 1.42e-08 | 83 |
epithelial tube open at both ends | 1.44e-08 | 59 |
blood vessel | 1.44e-08 | 59 |
blood vasculature | 1.44e-08 | 59 |
vascular cord | 1.44e-08 | 59 |
egg chorion | 7.26e-08 | 3 |