FFCP PHASE1:Hg19::chr2:29703653..29703657,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:29703653..29703657,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_at_chr2:29703653..29703657,- | |description=CAGE_peak_at_chr2:29703653..29703657,- | ||
|id=chr2:29703653..29703657,- | |id=chr2:29703653..29703657,- | ||
|ontology_enrichment_celltype=CL:0000242!8.75e-10!2 | |ontology_enrichment_celltype=CL:0000242!8.75e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.38e-27;5!CL:0000047;1.07e-17;2!CL:0002321;7.75e-10;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.05e-34;1!UBERON:0003056;2.89e-12;3!UBERON:0005062;1.27e-09;4!UBERON:0007284;1.27e-09;4 | |||
|ontology_enrichment_disease=DOID:169!4.92e-18!6;DOID:171!3.89e-15!10;DOID:3095!1.27e-08!22;DOID:2994!1.27e-08!22 | |ontology_enrichment_disease=DOID:169!4.92e-18!6;DOID:171!3.89e-15!10;DOID:3095!1.27e-08!22;DOID:2994!1.27e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:169;5.43e-23;6!DOID:3193;1.07e-17;2!DOID:962;1.07e-17;2!DOID:171;3.04e-14;10!DOID:1192;2.89e-12;3!DOID:3095;5.24e-07;22!DOID:2994;5.24e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.07e-23,6;DOID:3193,1.27e-17,2;DOID:962,1.27e-17,2;DOID:171,3.25e-14,10;DOID:1192,3.24e-12,3;DOID:3095,5.40e-07,22;DOID:2994,5.40e-07,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003714;7.72e-66;2!UBERON:0002134;3.05e-34;1!UBERON:0005208;3.05e-34;1!UBERON:0004145;3.05e-34;1!UBERON:0005946;3.05e-34;1!UBERON:0005965;3.05e-34;1!UBERON:0002078;3.05e-34;1!UBERON:0000941;7.05e-34;1!UBERON:0001785;7.05e-34;1!UBERON:0002464;7.05e-34;1!UBERON:0004904;7.05e-34;1!UBERON:0001021;7.05e-34;1!UBERON:0000010;1.55e-33;8!UBERON:0000013;2.38e-27;5!UBERON:0002410;2.38e-27;5!UBERON:0002081;7.05e-18;2!UBERON:0002133;7.05e-18;2!UBERON:0005162;1.07e-17;2!UBERON:0000122;1.07e-17;2!UBERON:0003978;2.19e-12;3!UBERON:0004151;2.19e-12;3!UBERON:0000946;2.19e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,7.73e-66,2;UBERON:0002134,2.58e-34,1;UBERON:0005208,2.58e-34,1;UBERON:0005946,2.58e-34,1;UBERON:0005965,2.58e-34,1;UBERON:0002078,2.58e-34,1;UBERON:0000941,5.05e-34,1;UBERON:0001785,5.05e-34,1;UBERON:0002464,5.05e-34,1;UBERON:0004904,5.05e-34,1;UBERON:0001021,5.05e-34,1;UBERON:0003902,5.05e-34,1;UBERON:0005425,5.05e-34,1;UBERON:0000010,1.55e-33,8;UBERON:0000013,2.72e-27,5;UBERON:0002410,2.72e-27,5;UBERON:0002081,6.48e-18,2;UBERON:0002133,6.48e-18,2;UBERON:0010227,6.48e-18,2;UBERON:0005162,9.07e-18,2;UBERON:0000122,9.07e-18,2;UBERON:0003978,2.07e-12,3;UBERON:0009751,2.07e-12,3;UBERON:0004151,2.07e-12,3;UBERON:0000946,2.07e-12,3;UBERON:0002523,2.07e-12,3;UBERON:0005983,2.07e-12,3;UBERON:0004145,2.07e-12,3;UBERON:0002165,2.07e-12,3;UBERON:0002062,2.07e-12,3;UBERON:0007280,2.07e-12,3;UBERON:0001781,1.44e-09,4;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6 | |||
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| ||
|short_description=p@chr2:29703653..29703657,- | |short_description=p@chr2:29703653..29703657,- | ||
}} | }} |
Latest revision as of 09:29, 29 July 2015
Short description: | p@chr2:29703653..29703657, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:29703653..29703657, - |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 7.73e-66 | 2 |
tricuspid valve | 2.58e-34 | 1 |
right atrium valve | 2.58e-34 | 1 |
outflow tract of atrium | 2.58e-34 | 1 |
outflow part of right atrium | 2.58e-34 | 1 |
right cardiac atrium | 2.58e-34 | 1 |
cranial nerve II | 5.05e-34 | 1 |
cranial nerve | 5.05e-34 | 1 |
nerve trunk | 5.05e-34 | 1 |
nerve connecting eye with brain | 5.05e-34 | 1 |
nerve | 5.05e-34 | 1 |
retinal neural layer | 5.05e-34 | 1 |
presumptive neural retina | 5.05e-34 | 1 |
peripheral nervous system | 1.55e-33 | 8 |
sympathetic nervous system | 2.72e-27 | 5 |
autonomic nervous system | 2.72e-27 | 5 |
cardiac atrium | 6.48e-18 | 2 |
atrioventricular valve | 6.48e-18 | 2 |
future cardiac atrium | 6.48e-18 | 2 |
multi cell component structure | 9.07e-18 | 2 |
neuron projection bundle | 9.07e-18 | 2 |
valve | 2.07e-12 | 3 |
cardiac mesenchyme | 2.07e-12 | 3 |
cardiac chamber | 2.07e-12 | 3 |
cardial valve | 2.07e-12 | 3 |
tunica intima | 2.07e-12 | 3 |
heart layer | 2.07e-12 | 3 |
outflow tract | 2.07e-12 | 3 |
endocardium | 2.07e-12 | 3 |
endocardial cushion | 2.07e-12 | 3 |
presumptive endocardium | 2.07e-12 | 3 |
layer of retina | 1.44e-09 | 4 |
retina | 8.48e-07 | 6 |
photoreceptor array | 8.48e-07 | 6 |
posterior segment of eyeball | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.07e-23 | 6 |
peripheral nerve sheath neoplasm | 1.27e-17 | 2 |
neurofibroma | 1.27e-17 | 2 |
neuroectodermal tumor | 3.25e-14 | 10 |
peripheral nervous system neoplasm | 3.24e-12 | 3 |
germ cell and embryonal cancer | 5.40e-07 | 22 |
germ cell cancer | 5.40e-07 | 22 |