FFCP PHASE1:Hg19::chr2:29645795..29645797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:29645795..29645797,+ | |||
|coexpression_cluster_id=C102 | |coexpression_cluster_id=C102 | ||
|description=CAGE_peak_at_chr2:29645795..29645797,+ | |description=CAGE_peak_at_chr2:29645795..29645797,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;4.21e-21;5!CL:0002321;5.55e-08;15 | |ontology_enrichment_celltype_v019=CL:0000333;4.21e-21;5!CL:0002321;5.55e-08;15 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.55e-98;1!UBERON:0003056;5.96e-34;3 | |ontology_enrichment_development_v019=UBERON:0005425;2.55e-98;1!UBERON:0003056;5.96e-34;3 | ||
|ontology_enrichment_disease=DOID:171!7.69e-17!10;DOID:169!4.26e-13!6;DOID:3095!5.39e-08!22;DOID:2994!5.39e-08!22 | |ontology_enrichment_disease=DOID:171!7.69e-17!10;DOID:169!4.26e-13!6;DOID:3095!5.39e-08!22;DOID:2994!5.39e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | |ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0003978!3.82e-25!3;UBERON:0009751!3.82e-25!3;UBERON:0000946!3.82e-25!3;UBERON:0002523!3.82e-25!3;UBERON:0005983!3.82e-25!3;UBERON:0002165!3.82e-25!3;UBERON:0002062!3.82e-25!3;UBERON:0007280!3.82e-25!3;UBERON:0000941!1.08e-19!1;UBERON:0004904!1.08e-19!1;UBERON:0002464!1.08e-19!1;UBERON:0001021!1.08e-19!1;UBERON:0001785!1.08e-19!1;UBERON:0002134!1.30e-19!1;UBERON:0005208!1.30e-19!1;UBERON:0005946!1.30e-19!1;UBERON:0005965!1.30e-19!1;UBERON:0002078!1.30e-19!1;UBERON:0002146!2.25e-19!1;UBERON:0005623!2.25e-19!1;UBERON:0000010!7.23e-19!8;UBERON:0000013!1.62e-15!5;UBERON:0002410!1.62e-15!5;UBERON:0003714!1.57e-10!2;UBERON:0005162!1.57e-10!2;UBERON:0000122!1.57e-10!2;UBERON:0002081!1.72e-10!2;UBERON:0002133!1.72e-10!2;UBERON:0004151!2.05e-07!3;UBERON:0004145!2.05e-07!3 | |ontology_enrichment_uberon=UBERON:0003978!3.82e-25!3;UBERON:0009751!3.82e-25!3;UBERON:0000946!3.82e-25!3;UBERON:0002523!3.82e-25!3;UBERON:0005983!3.82e-25!3;UBERON:0002165!3.82e-25!3;UBERON:0002062!3.82e-25!3;UBERON:0007280!3.82e-25!3;UBERON:0000941!1.08e-19!1;UBERON:0004904!1.08e-19!1;UBERON:0002464!1.08e-19!1;UBERON:0001021!1.08e-19!1;UBERON:0001785!1.08e-19!1;UBERON:0002134!1.30e-19!1;UBERON:0005208!1.30e-19!1;UBERON:0005946!1.30e-19!1;UBERON:0005965!1.30e-19!1;UBERON:0002078!1.30e-19!1;UBERON:0002146!2.25e-19!1;UBERON:0005623!2.25e-19!1;UBERON:0000010!7.23e-19!8;UBERON:0000013!1.62e-15!5;UBERON:0002410!1.62e-15!5;UBERON:0003714!1.57e-10!2;UBERON:0005162!1.57e-10!2;UBERON:0000122!1.57e-10!2;UBERON:0002081!1.72e-10!2;UBERON:0002133!1.72e-10!2;UBERON:0004151!2.05e-07!3;UBERON:0004145!2.05e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.55e-98;1!UBERON:0001785;2.55e-98;1!UBERON:0002464;2.55e-98;1!UBERON:0004904;2.55e-98;1!UBERON:0001021;2.55e-98;1!UBERON:0003714;4.52e-50;2!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0000010;9.75e-45;8!UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0004732;5.70e-09;13 | |ontology_enrichment_uberon_v019=UBERON:0000941;2.55e-98;1!UBERON:0001785;2.55e-98;1!UBERON:0002464;2.55e-98;1!UBERON:0004904;2.55e-98;1!UBERON:0001021;2.55e-98;1!UBERON:0003714;4.52e-50;2!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0000010;9.75e-45;8!UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0004732;5.70e-09;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-98,1;UBERON:0001785,2.55e-98,1;UBERON:0002464,2.55e-98,1;UBERON:0004904,2.55e-98,1;UBERON:0001021,2.55e-98,1;UBERON:0003902,2.55e-98,1;UBERON:0005425,2.55e-98,1;UBERON:0003714,4.52e-50,2;UBERON:0005162,4.52e-50,2;UBERON:0000122,4.52e-50,2;UBERON:0000010,9.75e-45,8;UBERON:0001781,7.14e-26,4;UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0004732,5.70e-09,13 | |||
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|short_description=p@chr2:29645795..29645797,+ | |short_description=p@chr2:29645795..29645797,+ | ||
}} | }} |
Latest revision as of 09:29, 29 July 2015
Short description: | p@chr2:29645795..29645797, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:29645795..29645797, + |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-98 | 1 |
cranial nerve | 2.55e-98 | 1 |
nerve trunk | 2.55e-98 | 1 |
nerve connecting eye with brain | 2.55e-98 | 1 |
nerve | 2.55e-98 | 1 |
retinal neural layer | 2.55e-98 | 1 |
presumptive neural retina | 2.55e-98 | 1 |
neural tissue | 4.52e-50 | 2 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
peripheral nervous system | 9.75e-45 | 8 |
layer of retina | 7.14e-26 | 4 |
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |