FFCP PHASE1:Hg19::chr2:26139327..26139333,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:26139327..26139333,+ | |||
|coexpression_cluster_id=C2572 | |coexpression_cluster_id=C2572 | ||
|description=CAGE_peak_at_chr2:26139327..26139333,+ | |description=CAGE_peak_at_chr2:26139327..26139333,+ | ||
|id=chr2:26139327..26139333,+ | |id=chr2:26139327..26139333,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.04e-21!172;CL:0000566!1.04e-21!172;CL:0000988!7.18e-21!182;CL:0002032!2.87e-17!165;CL:0000837!2.87e-17!165;CL:0000763!4.64e-12!112;CL:0000049!4.64e-12!112;CL:0002274!8.20e-12!5;CL:0000457!8.20e-12!5;CL:0002191!8.20e-12!5;CL:0000097!8.20e-12!5;CL:0000831!8.20e-12!5;CL:0002028!8.20e-12!5;CL:0000084!1.91e-09!25;CL:0000827!1.91e-09!25;CL:0000784!2.78e-08!3;CL:0002150!1.04e-07!3;CL:0000861!1.04e-07!3;CL:0000738!4.07e-07!140 | |ontology_enrichment_celltype=CL:0000037!1.04e-21!172;CL:0000566!1.04e-21!172;CL:0000988!7.18e-21!182;CL:0002032!2.87e-17!165;CL:0000837!2.87e-17!165;CL:0000763!4.64e-12!112;CL:0000049!4.64e-12!112;CL:0002274!8.20e-12!5;CL:0000457!8.20e-12!5;CL:0002191!8.20e-12!5;CL:0000097!8.20e-12!5;CL:0000831!8.20e-12!5;CL:0002028!8.20e-12!5;CL:0000084!1.91e-09!25;CL:0000827!1.91e-09!25;CL:0000784!2.78e-08!3;CL:0002150!1.04e-07!3;CL:0000861!1.04e-07!3;CL:0000738!4.07e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.98e-10;1!CL:0000911;1.98e-10;1!CL:0000814;1.98e-10;1!CL:0000097;1.09e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.15e-13,168;CL:0000988,8.02e-13,177;CL:0002032,5.27e-11,161;CL:0000837,5.27e-11,161;CL:0002127,1.98e-10,1;CL:0000914,1.98e-10,1;CL:0000911,1.98e-10,1;CL:0000814,1.98e-10,1;CL:0002042,1.98e-10,1;CL:0002039,1.98e-10,1;CL:0002040,1.98e-10,1;CL:0002041,1.98e-10,1;CL:0000763,2.10e-09,108;CL:0000049,2.10e-09,108;CL:0000097,9.88e-08,5;CL:0002028,9.88e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!4.28e-31!39;DOID:2531!2.93e-26!51;DOID:0060083!2.93e-26!51;DOID:8692!2.47e-24!31;DOID:162!2.40e-08!235;DOID:14566!5.92e-08!239;DOID:0050686!8.34e-08!137 | |ontology_enrichment_disease=DOID:1240!4.28e-31!39;DOID:2531!2.93e-26!51;DOID:0060083!2.93e-26!51;DOID:8692!2.47e-24!31;DOID:162!2.40e-08!235;DOID:14566!5.92e-08!239;DOID:0050686!8.34e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:1240;5.38e-28;39!DOID:2531;6.65e-25;51!DOID:0060083;6.65e-25;51!DOID:8692;3.32e-24;31!DOID:9119;5.07e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.29e-41,39;DOID:2531,6.82e-36,51;DOID:0060083,6.82e-36,51;DOID:8692,2.33e-26,31;DOID:0050686,1.16e-11,137;DOID:9119,5.30e-10,1;DOID:162,9.06e-08,235;DOID:14566,1.51e-07,239 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.24e-10,4;UBERON:0005058,7.24e-10,4;UBERON:0009113,7.24e-10,4;UBERON:0003295,7.24e-10,4;UBERON:0005562,7.24e-10,4;UBERON:0003351,7.47e-07,6 | |||
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| ||
|short_description=p@chr2:26139327..26139333,+ | |short_description=p@chr2:26139327..26139333,+ | ||
}} | }} |
Latest revision as of 08:57, 29 July 2015
Short description: | p@chr2:26139327..26139333, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:26139327..26139333, + |
Coexpression cluster: | C2572_NK_chronic_embryonic_lymphoma_epithelioid_acute_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.15e-13 | 168 |
hematopoietic cell | 8.02e-13 | 177 |
hematopoietic oligopotent progenitor cell | 5.27e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.27e-11 | 161 |
innate effector T cell | 1.98e-10 | 1 |
immature NK T cell | 1.98e-10 | 1 |
effector T cell | 1.98e-10 | 1 |
mature NK T cell | 1.98e-10 | 1 |
immature NK T cell stage IV | 1.98e-10 | 1 |
immature NK T cell stage I | 1.98e-10 | 1 |
immature NK T cell stage II | 1.98e-10 | 1 |
immature NK T cell stage III | 1.98e-10 | 1 |
myeloid cell | 2.10e-09 | 108 |
common myeloid progenitor | 2.10e-09 | 108 |
mast cell | 9.88e-08 | 5 |
basophil mast progenitor cell | 9.88e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.24e-10 | 4 |
hemolymphoid system gland | 7.24e-10 | 4 |
thymic region | 7.24e-10 | 4 |
pharyngeal gland | 7.24e-10 | 4 |
thymus primordium | 7.24e-10 | 4 |
pharyngeal epithelium | 7.47e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.29e-41 | 39 |
hematologic cancer | 6.82e-36 | 51 |
immune system cancer | 6.82e-36 | 51 |
myeloid leukemia | 2.33e-26 | 31 |
organ system cancer | 1.16e-11 | 137 |
acute myeloid leukemia | 5.30e-10 | 1 |
cancer | 9.06e-08 | 235 |
disease of cellular proliferation | 1.51e-07 | 239 |