FFCP PHASE1:Hg19::chr2:24585157..24585182,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:24585157..24585182,- | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_at_chr2:24585157..24585182,- | |description=CAGE_peak_at_chr2:24585157..24585182,- | ||
|id=chr2:24585157..24585182,- | |id=chr2:24585157..24585182,- | ||
|ontology_enrichment_celltype=CL:0002563!1.86e-10!4;CL:0002537!1.37e-08!5;CL:0000312!1.54e-08!5;CL:0000240!2.96e-07!6;CL:0000311!2.96e-07!6;CL:0000079!2.96e-07!6;CL:0000237!2.96e-07!6;CL:0000036!2.96e-07!6;CL:0000357!2.96e-07!6;CL:0000114!2.96e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.86e-10!4;CL:0002537!1.37e-08!5;CL:0000312!1.54e-08!5;CL:0000240!2.96e-07!6;CL:0000311!2.96e-07!6;CL:0000079!2.96e-07!6;CL:0000237!2.96e-07!6;CL:0000036!2.96e-07!6;CL:0000357!2.96e-07!6;CL:0000114!2.96e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.02e-23;7!CL:0000586;1.02e-23;7!CL:0000083;3.42e-11;4!CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.02e-23,7;CL:0000586,1.02e-23,7;CL:0000083,3.42e-11,4;CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |||
|ontology_enrichment_disease=DOID:178!3.08e-11!1;DOID:326!3.08e-11!1;DOID:3978!3.08e-11!1;DOID:3394!3.08e-11!1;DOID:5844!3.08e-11!1;DOID:1799!3.41e-11!1;DOID:10165!3.41e-11!1;DOID:1798!3.41e-11!1 | |ontology_enrichment_disease=DOID:178!3.08e-11!1;DOID:326!3.08e-11!1;DOID:3978!3.08e-11!1;DOID:3394!3.08e-11!1;DOID:5844!3.08e-11!1;DOID:1799!3.41e-11!1;DOID:10165!3.41e-11!1;DOID:1798!3.41e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;2.21e-40;1!DOID:10165;2.21e-40;1!DOID:178;2.21e-40;1!DOID:326;2.21e-40;1!DOID:3978;2.21e-40;1!DOID:3394;2.21e-40;1!DOID:5844;2.21e-40;1!DOID:1798;2.21e-40;1!DOID:114;5.69e-21;2!DOID:1287;3.42e-11;4!DOID:1793;3.42e-11;4!DOID:3095;2.82e-08;22!DOID:2994;2.82e-08;22!DOID:170;6.78e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.48e-40,1;DOID:326,1.48e-40,1;DOID:3978,1.48e-40,1;DOID:3394,1.48e-40,1;DOID:5844,1.48e-40,1;DOID:1799,2.21e-40,1;DOID:10165,2.21e-40,1;DOID:1798,2.21e-40,1;DOID:114,4.66e-21,2;DOID:1287,3.10e-11,4;DOID:1793,3.42e-11,4;DOID:3095,2.82e-08,22;DOID:2994,2.82e-08,22;DOID:170,6.78e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002372!5.57e-11!1;UBERON:0001961!5.57e-11!1;UBERON:0001744!5.57e-11!1;UBERON:0001735!5.57e-11!1;UBERON:0001242!1.86e-10!4;UBERON:0001262!1.86e-10!4;UBERON:0004786!1.86e-10!4;UBERON:0004808!1.86e-10!4;UBERON:0001277!1.86e-10!4;UBERON:0003350!1.54e-08!5;UBERON:0000344!1.03e-07!12 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr2:24585157..24585182,- | |short_description=p@chr2:24585157..24585182,- | ||
}} | }} |
Latest revision as of 08:50, 29 July 2015
Short description: | p@chr2:24585157..24585182, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:24585157..24585182, - |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.02e-23 | 7 |
germ cell | 1.02e-23 | 7 |
epithelial cell of pancreas | 3.42e-11 | 4 |
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.48e-40 | 1 |
ischemia | 1.48e-40 | 1 |
extrinsic cardiomyopathy | 1.48e-40 | 1 |
myocardial ischemia | 1.48e-40 | 1 |
myocardial infarction | 1.48e-40 | 1 |
islet cell tumor | 2.21e-40 | 1 |
endocrine pancreas cancer | 2.21e-40 | 1 |
pancreatic endocrine carcinoma | 2.21e-40 | 1 |
heart disease | 4.66e-21 | 2 |
cardiovascular system disease | 3.10e-11 | 4 |
pancreatic cancer | 3.42e-11 | 4 |
germ cell and embryonal cancer | 2.82e-08 | 22 |
germ cell cancer | 2.82e-08 | 22 |
endocrine gland cancer | 6.78e-08 | 6 |