FFCP PHASE1:Hg19::chr2:242824142..242824158,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=43bp_to_ENST00000429947_5end | |association_with_transcript=43bp_to_ENST00000429947_5end | ||
|cluster_id=chr2:242824142..242824158,+ | |||
|coexpression_cluster_id=C2695 | |coexpression_cluster_id=C2695 | ||
|description=CAGE_peak_2_at_ENST00000429947_5end | |description=CAGE_peak_2_at_ENST00000429947_5end | ||
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|ontology_enrichment_celltype=CL:0000945!3.16e-18!24;CL:0000826!3.16e-18!24;CL:0000542!1.05e-16!53;CL:0000051!1.05e-16!53;CL:0000838!1.43e-15!52;CL:0000236!1.78e-12!14;CL:0000037!1.03e-07!172;CL:0000566!1.03e-07!172;CL:0000784!1.92e-07!3;CL:0000988!9.27e-07!182 | |ontology_enrichment_celltype=CL:0000945!3.16e-18!24;CL:0000826!3.16e-18!24;CL:0000542!1.05e-16!53;CL:0000051!1.05e-16!53;CL:0000838!1.43e-15!52;CL:0000236!1.78e-12!14;CL:0000037!1.03e-07!172;CL:0000566!1.03e-07!172;CL:0000784!1.92e-07!3;CL:0000988!9.27e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.55e-19;3!CL:0000236;4.97e-11;13!CL:0000333;6.89e-11;5!CL:0000817;1.49e-07;1!CL:0002032;2.22e-07;1!CL:0000037;2.22e-07;1!CL:0001024;2.22e-07;1!CL:0000557;2.22e-07;1!CL:0000785;4.74e-07;1!CL:0000819;4.74e-07;1 | |ontology_enrichment_celltype_v019=CL:0000784;3.55e-19;3!CL:0000236;4.97e-11;13!CL:0000333;6.89e-11;5!CL:0000817;1.49e-07;1!CL:0002032;2.22e-07;1!CL:0000037;2.22e-07;1!CL:0001024;2.22e-07;1!CL:0000557;2.22e-07;1!CL:0000785;4.74e-07;1!CL:0000819;4.74e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.46e-19,3;CL:0000236,2.41e-10,14;CL:0000817,5.62e-09,3;CL:0001024,2.84e-07,1;CL:0000819,3.85e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.63e-07;1!UBERON:0008425;2.22e-07;1 | |ontology_enrichment_development_v019=UBERON:0005754;1.63e-07;1!UBERON:0008425;2.22e-07;1 | ||
|ontology_enrichment_disease=DOID:171!6.28e-15!10;DOID:169!5.49e-08!6;DOID:3095!7.22e-07!22;DOID:2994!7.22e-07!22 | |ontology_enrichment_disease=DOID:171!6.28e-15!10;DOID:169!5.49e-08!6;DOID:3095!7.22e-07!22;DOID:2994!7.22e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:171;1.29e-20;10!DOID:169;3.72e-09;6!DOID:3095;4.38e-09;22!DOID:2994;4.38e-09;22!DOID:0060073;4.74e-07;1!DOID:8675;4.74e-07;1 | |ontology_enrichment_disease_v019=DOID:171;1.29e-20;10!DOID:169;3.72e-09;6!DOID:3095;4.38e-09;22!DOID:2994;4.38e-09;22!DOID:0060073;4.74e-07;1!DOID:8675;4.74e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:171,1.90e-20,10;DOID:169,4.35e-09,6;DOID:3095,5.17e-09,22;DOID:2994,5.17e-09,22;DOID:0060073,3.85e-07,1;DOID:8675,3.85e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.79e-14;4!UBERON:0000923;3.79e-14;4!UBERON:0010316;3.79e-14;4!UBERON:0005291;3.79e-14;4!UBERON:0002370;1.30e-13;2!UBERON:0005058;1.30e-13;2!UBERON:0009113;1.30e-13;2!UBERON:0002050;2.02e-11;5!UBERON:0005423;2.02e-11;5!UBERON:0000013;6.89e-11;5!UBERON:0002410;6.89e-11;5!UBERON:0006947;4.25e-09;3!UBERON:0004054;4.25e-09;3!UBERON:0000998;1.63e-07;1!UBERON:0006868;1.63e-07;1!UBERON:0001000;2.22e-07;1!UBERON:0005352;2.22e-07;1!UBERON:0005904;5.04e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002346;3.79e-14;4!UBERON:0000923;3.79e-14;4!UBERON:0010316;3.79e-14;4!UBERON:0005291;3.79e-14;4!UBERON:0002370;1.30e-13;2!UBERON:0005058;1.30e-13;2!UBERON:0009113;1.30e-13;2!UBERON:0002050;2.02e-11;5!UBERON:0005423;2.02e-11;5!UBERON:0000013;6.89e-11;5!UBERON:0002410;6.89e-11;5!UBERON:0006947;4.25e-09;3!UBERON:0004054;4.25e-09;3!UBERON:0000998;1.63e-07;1!UBERON:0006868;1.63e-07;1!UBERON:0001000;2.22e-07;1!UBERON:0005352;2.22e-07;1!UBERON:0005904;5.04e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,8.34e-11,5;UBERON:0002410,8.34e-11,5;UBERON:0006947,4.60e-09,3;UBERON:0004054,4.60e-09,3;UBERON:0000998,1.63e-07,1;UBERON:0006868,1.63e-07,1;UBERON:0001000,2.52e-07,1;UBERON:0005352,2.52e-07,1;UBERON:0002370,3.03e-07,4;UBERON:0005058,3.03e-07,4;UBERON:0009113,3.03e-07,4;UBERON:0003295,3.03e-07,4;UBERON:0005562,3.03e-07,4;UBERON:0005904,5.36e-07,4 | |||
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| ||
|short_description=p2@ENST00000429947 | |short_description=p2@ENST00000429947 | ||
}} | }} |
Latest revision as of 08:46, 29 July 2015
Short description: | p2@ENST00000429947 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000429947_5end |
Coexpression cluster: | C2695_neuroectodermal_Dendritic_thymus_acute_granulocyte_CD19_neuroblastoma |
Association with transcript: | 43bp_to_ENST00000429947_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.46e-19 | 3 |
B cell | 2.41e-10 | 14 |
precursor B cell | 5.62e-09 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.84e-07 | 1 |
B-1 B cell | 3.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 8.34e-11 | 5 |
autonomic nervous system | 8.34e-11 | 5 |
male genital duct | 4.60e-09 | 3 |
internal male genitalia | 4.60e-09 | 3 |
seminal vesicle | 1.63e-07 | 1 |
seminal fluid secreting gland | 1.63e-07 | 1 |
vas deferens | 2.52e-07 | 1 |
spermatic cord | 2.52e-07 | 1 |
thymus | 3.03e-07 | 4 |
hemolymphoid system gland | 3.03e-07 | 4 |
thymic region | 3.03e-07 | 4 |
pharyngeal gland | 3.03e-07 | 4 |
thymus primordium | 3.03e-07 | 4 |
duct of male reproductive system | 5.36e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.90e-20 | 10 |
neuroendocrine tumor | 4.35e-09 | 6 |
germ cell and embryonal cancer | 5.17e-09 | 22 |
germ cell cancer | 5.17e-09 | 22 |
lymphatic system cancer | 3.85e-07 | 1 |
lymphosarcoma | 3.85e-07 | 1 |