FFCP PHASE1:Hg19::chr2:242824142..242824158,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=43bp_to_ENST00000429947_5end | |association_with_transcript=43bp_to_ENST00000429947_5end | ||
|cluster_id=chr2:242824142..242824158,+ | |||
|coexpression_cluster_id=C2695 | |||
|description=CAGE_peak_2_at_ENST00000429947_5end | |description=CAGE_peak_2_at_ENST00000429947_5end | ||
|id=chr2:242824142..242824158,+ | |id=chr2:242824142..242824158,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.16e-18!24;CL:0000826!3.16e-18!24;CL:0000542!1.05e-16!53;CL:0000051!1.05e-16!53;CL:0000838!1.43e-15!52;CL:0000236!1.78e-12!14;CL:0000037!1.03e-07!172;CL:0000566!1.03e-07!172;CL:0000784!1.92e-07!3;CL:0000988!9.27e-07!182 | |ontology_enrichment_celltype=CL:0000945!3.16e-18!24;CL:0000826!3.16e-18!24;CL:0000542!1.05e-16!53;CL:0000051!1.05e-16!53;CL:0000838!1.43e-15!52;CL:0000236!1.78e-12!14;CL:0000037!1.03e-07!172;CL:0000566!1.03e-07!172;CL:0000784!1.92e-07!3;CL:0000988!9.27e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.55e-19;3!CL:0000236;4.97e-11;13!CL:0000333;6.89e-11;5!CL:0000817;1.49e-07;1!CL:0002032;2.22e-07;1!CL:0000037;2.22e-07;1!CL:0001024;2.22e-07;1!CL:0000557;2.22e-07;1!CL:0000785;4.74e-07;1!CL:0000819;4.74e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.46e-19,3;CL:0000236,2.41e-10,14;CL:0000817,5.62e-09,3;CL:0001024,2.84e-07,1;CL:0000819,3.85e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.63e-07;1!UBERON:0008425;2.22e-07;1 | |||
|ontology_enrichment_disease=DOID:171!6.28e-15!10;DOID:169!5.49e-08!6;DOID:3095!7.22e-07!22;DOID:2994!7.22e-07!22 | |ontology_enrichment_disease=DOID:171!6.28e-15!10;DOID:169!5.49e-08!6;DOID:3095!7.22e-07!22;DOID:2994!7.22e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:171;1.29e-20;10!DOID:169;3.72e-09;6!DOID:3095;4.38e-09;22!DOID:2994;4.38e-09;22!DOID:0060073;4.74e-07;1!DOID:8675;4.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.90e-20,10;DOID:169,4.35e-09,6;DOID:3095,5.17e-09,22;DOID:2994,5.17e-09,22;DOID:0060073,3.85e-07,1;DOID:8675,3.85e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.79e-14;4!UBERON:0000923;3.79e-14;4!UBERON:0010316;3.79e-14;4!UBERON:0005291;3.79e-14;4!UBERON:0002370;1.30e-13;2!UBERON:0005058;1.30e-13;2!UBERON:0009113;1.30e-13;2!UBERON:0002050;2.02e-11;5!UBERON:0005423;2.02e-11;5!UBERON:0000013;6.89e-11;5!UBERON:0002410;6.89e-11;5!UBERON:0006947;4.25e-09;3!UBERON:0004054;4.25e-09;3!UBERON:0000998;1.63e-07;1!UBERON:0006868;1.63e-07;1!UBERON:0001000;2.22e-07;1!UBERON:0005352;2.22e-07;1!UBERON:0005904;5.04e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,8.34e-11,5;UBERON:0002410,8.34e-11,5;UBERON:0006947,4.60e-09,3;UBERON:0004054,4.60e-09,3;UBERON:0000998,1.63e-07,1;UBERON:0006868,1.63e-07,1;UBERON:0001000,2.52e-07,1;UBERON:0005352,2.52e-07,1;UBERON:0002370,3.03e-07,4;UBERON:0005058,3.03e-07,4;UBERON:0009113,3.03e-07,4;UBERON:0003295,3.03e-07,4;UBERON:0005562,3.03e-07,4;UBERON:0005904,5.36e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0.426507697462265,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,1.75996244461323,0.546138611262131,1.77901850772711,0,0,0,0.661044872784862,0,0.569212969109448,1.17447437874188,0.764546456250458,5.28685314316103,0,2.37045676297569,0,0.393010762749165,0,0,0.651844533267181,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0,1.00803371612366,1.06976078313403,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,5.00830311041218,2.85997455390064,4.45749001595478,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.929015875628594,4.47234560226979,1.42283686696828,0.318852545457645,1.79621434289535,0,0.635020748171649,0,0,7.75997908712854,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47787785689595,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0.260427761085233,2.97363999987065,0,0.227586896570999,0.254253650292766,0.472775363535873,0,0.291604613383254,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,1.45963831372533,0,0,2.36750641709634,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,1.25812753484717,1.20130602011215,0.509197589862076,5.10179808244039,2.85052257795705,1.11728983594649,0,1.10406443001755,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0.496211178389294,1.05522746615772,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0.111231401892069,0.39246546425257,0.157115589916002,0,0,0,0,0,0,0.23248285073625,0.173858272302579,0,0,0,0,0.430227358820278,0,0,3.38709640152743,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0.397901550322736,0,0,0.109940516745429,0.150962843566674,0,0,1.41095188908457,0,0.235676547101626,0,0,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,5.23170169671649,5.71087371521893,0,0.0636471582781649,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.40891655513718,0 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| ||
|short_description=p2@ENST00000429947 | |short_description=p2@ENST00000429947 | ||
}} | }} |
Latest revision as of 08:46, 29 July 2015
Short description: | p2@ENST00000429947 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000429947_5end |
Coexpression cluster: | C2695_neuroectodermal_Dendritic_thymus_acute_granulocyte_CD19_neuroblastoma |
Association with transcript: | 43bp_to_ENST00000429947_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.46e-19 | 3 |
B cell | 2.41e-10 | 14 |
precursor B cell | 5.62e-09 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.84e-07 | 1 |
B-1 B cell | 3.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 8.34e-11 | 5 |
autonomic nervous system | 8.34e-11 | 5 |
male genital duct | 4.60e-09 | 3 |
internal male genitalia | 4.60e-09 | 3 |
seminal vesicle | 1.63e-07 | 1 |
seminal fluid secreting gland | 1.63e-07 | 1 |
vas deferens | 2.52e-07 | 1 |
spermatic cord | 2.52e-07 | 1 |
thymus | 3.03e-07 | 4 |
hemolymphoid system gland | 3.03e-07 | 4 |
thymic region | 3.03e-07 | 4 |
pharyngeal gland | 3.03e-07 | 4 |
thymus primordium | 3.03e-07 | 4 |
duct of male reproductive system | 5.36e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.90e-20 | 10 |
neuroendocrine tumor | 4.35e-09 | 6 |
germ cell and embryonal cancer | 5.17e-09 | 22 |
germ cell cancer | 5.17e-09 | 22 |
lymphatic system cancer | 3.85e-07 | 1 |
lymphosarcoma | 3.85e-07 | 1 |