FFCP PHASE1:Hg19::chr2:240189135..240189153,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:240189135..240189153,- | |||
|coexpression_cluster_id=C451 | |coexpression_cluster_id=C451 | ||
|description=CAGE_peak_at_chr2:240189135..240189153,- | |description=CAGE_peak_at_chr2:240189135..240189153,- | ||
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|ontology_enrichment_celltype=CL:0000738!4.99e-46!140;CL:0002057!8.27e-42!42;CL:0000766!2.32e-41!76;CL:0002087!9.60e-41!119;CL:0000037!4.97e-40!172;CL:0000566!4.97e-40!172;CL:0002032!8.62e-39!165;CL:0000837!8.62e-39!165;CL:0000988!1.02e-38!182;CL:0000860!3.66e-38!45;CL:0002031!3.92e-38!124;CL:0000839!1.10e-33!70;CL:0002194!1.54e-33!63;CL:0000576!1.54e-33!63;CL:0000040!1.54e-33!63;CL:0000559!1.54e-33!63;CL:0000557!5.28e-33!71;CL:0002009!4.37e-32!65;CL:0000763!5.56e-31!112;CL:0000049!5.56e-31!112;CL:0002393!5.13e-13!9;CL:0002397!5.13e-13!9;CL:0000084!1.18e-12!25;CL:0000827!1.18e-12!25;CL:0000791!2.00e-09!18;CL:0000789!2.00e-09!18;CL:0002420!2.00e-09!18;CL:0002419!2.00e-09!18;CL:0000790!2.00e-09!18;CL:0000134!2.07e-08!358;CL:0002320!7.14e-08!365;CL:0000838!7.15e-08!52;CL:0000542!1.28e-07!53;CL:0000051!1.28e-07!53;CL:0000094!1.70e-07!8;CL:0000219!9.68e-07!390 | |ontology_enrichment_celltype=CL:0000738!4.99e-46!140;CL:0002057!8.27e-42!42;CL:0000766!2.32e-41!76;CL:0002087!9.60e-41!119;CL:0000037!4.97e-40!172;CL:0000566!4.97e-40!172;CL:0002032!8.62e-39!165;CL:0000837!8.62e-39!165;CL:0000988!1.02e-38!182;CL:0000860!3.66e-38!45;CL:0002031!3.92e-38!124;CL:0000839!1.10e-33!70;CL:0002194!1.54e-33!63;CL:0000576!1.54e-33!63;CL:0000040!1.54e-33!63;CL:0000559!1.54e-33!63;CL:0000557!5.28e-33!71;CL:0002009!4.37e-32!65;CL:0000763!5.56e-31!112;CL:0000049!5.56e-31!112;CL:0002393!5.13e-13!9;CL:0002397!5.13e-13!9;CL:0000084!1.18e-12!25;CL:0000827!1.18e-12!25;CL:0000791!2.00e-09!18;CL:0000789!2.00e-09!18;CL:0002420!2.00e-09!18;CL:0002419!2.00e-09!18;CL:0000790!2.00e-09!18;CL:0000134!2.07e-08!358;CL:0002320!7.14e-08!365;CL:0000838!7.15e-08!52;CL:0000542!1.28e-07!53;CL:0000051!1.28e-07!53;CL:0000094!1.70e-07!8;CL:0000219!9.68e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000576;9.10e-25;48!CL:0000860;2.52e-23;33!CL:0002057;2.52e-23;33!CL:0002619;1.18e-17;3!CL:0000473;2.54e-16;39!CL:0000234;2.54e-16;39!CL:0000766;1.12e-12;69!CL:0000094;4.66e-11;8!CL:0002087;6.86e-09;104!CL:0000081;4.54e-08;11!CL:0000775;5.63e-08;3!CL:0000763;8.15e-08;100!CL:0000738;5.79e-07;136 | |ontology_enrichment_celltype_v019=CL:0000576;9.10e-25;48!CL:0000860;2.52e-23;33!CL:0002057;2.52e-23;33!CL:0002619;1.18e-17;3!CL:0000473;2.54e-16;39!CL:0000234;2.54e-16;39!CL:0000766;1.12e-12;69!CL:0000094;4.66e-11;8!CL:0002087;6.86e-09;104!CL:0000081;4.54e-08;11!CL:0000775;5.63e-08;3!CL:0000763;8.15e-08;100!CL:0000738;5.79e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.97e-32,72;CL:0000860,1.73e-26,42;CL:0002057,1.73e-26,42;CL:0002194,4.75e-26,59;CL:0000576,4.75e-26,59;CL:0000040,4.75e-26,59;CL:0000559,4.75e-26,59;CL:0002009,4.42e-25,61;CL:0000738,1.50e-23,136;CL:0000839,6.53e-23,66;CL:0000473,9.02e-23,48;CL:0000234,9.02e-23,48;CL:0000557,1.62e-22,67;CL:0002087,4.68e-20,115;CL:0000763,9.36e-20,108;CL:0000049,9.36e-20,108;CL:0002032,4.89e-19,161;CL:0000837,4.89e-19,161;CL:0002031,5.08e-19,120;CL:0000037,5.17e-18,168;CL:0002619,1.36e-17,3;CL:0000988,8.18e-17,177;CL:0000094,4.31e-11,8;CL:0000081,4.30e-08,11;CL:0000775,4.39e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.89e-18;42 | |ontology_enrichment_development_v019=CL:0002057;2.89e-18;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;4.82e-07;1!DOID:0070004;4.82e-07;1 | |ontology_enrichment_disease_v019=DOID:4960;4.82e-07;1!DOID:0070004;4.82e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,4.97e-07,1;DOID:0070004,4.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.31e-40!102;UBERON:0003061!2.31e-40!102;UBERON:0002193!1.61e-36!112;UBERON:0002371!2.13e-29!80;UBERON:0001474!2.54e-26!86;UBERON:0002405!2.79e-23!115;UBERON:0004765!2.81e-20!101;UBERON:0001434!2.81e-20!101;UBERON:0003081!1.82e-11!216;UBERON:0002384!1.65e-07!375;UBERON:0002204!2.89e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!2.31e-40!102;UBERON:0003061!2.31e-40!102;UBERON:0002193!1.61e-36!112;UBERON:0002371!2.13e-29!80;UBERON:0001474!2.54e-26!86;UBERON:0002405!2.79e-23!115;UBERON:0004765!2.81e-20!101;UBERON:0001434!2.81e-20!101;UBERON:0003081!1.82e-11!216;UBERON:0002384!1.65e-07!375;UBERON:0002204!2.89e-07!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.88e-22,76;UBERON:0001474,5.30e-20,82;UBERON:0002390,5.35e-20,98;UBERON:0003061,5.35e-20,98;UBERON:0002405,3.47e-19,93;UBERON:0004765,7.12e-18,90;UBERON:0002193,9.69e-18,108;UBERON:0001434,1.09e-15,100;UBERON:0002204,8.31e-08,167;UBERON:0003081,2.20e-07,203 | |||
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|short_description=p@chr2:240189135..240189153,- | |short_description=p@chr2:240189135..240189153,- | ||
}} | }} |
Latest revision as of 08:22, 29 July 2015
Short description: | p@chr2:240189135..240189153, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:240189135..240189153, - |
Coexpression cluster: | C451_CD14_CD4_Eosinophils_Neutrophils_adult_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.97e-32 | 72 |
classical monocyte | 1.73e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-26 | 42 |
monopoietic cell | 4.75e-26 | 59 |
monocyte | 4.75e-26 | 59 |
monoblast | 4.75e-26 | 59 |
promonocyte | 4.75e-26 | 59 |
macrophage dendritic cell progenitor | 4.42e-25 | 61 |
leukocyte | 1.50e-23 | 136 |
myeloid lineage restricted progenitor cell | 6.53e-23 | 66 |
defensive cell | 9.02e-23 | 48 |
phagocyte | 9.02e-23 | 48 |
granulocyte monocyte progenitor cell | 1.62e-22 | 67 |
nongranular leukocyte | 4.68e-20 | 115 |
myeloid cell | 9.36e-20 | 108 |
common myeloid progenitor | 9.36e-20 | 108 |
hematopoietic oligopotent progenitor cell | 4.89e-19 | 161 |
hematopoietic multipotent progenitor cell | 4.89e-19 | 161 |
hematopoietic lineage restricted progenitor cell | 5.08e-19 | 120 |
hematopoietic stem cell | 5.17e-18 | 168 |
adult endothelial progenitor cell | 1.36e-17 | 3 |
hematopoietic cell | 8.18e-17 | 177 |
granulocyte | 4.31e-11 | 8 |
blood cell | 4.30e-08 | 11 |
neutrophil | 4.39e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.88e-22 | 76 |
bone element | 5.30e-20 | 82 |
hematopoietic system | 5.35e-20 | 98 |
blood island | 5.35e-20 | 98 |
immune system | 3.47e-19 | 93 |
skeletal element | 7.12e-18 | 90 |
hemolymphoid system | 9.69e-18 | 108 |
skeletal system | 1.09e-15 | 100 |
musculoskeletal system | 8.31e-08 | 167 |
lateral plate mesoderm | 2.20e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.97e-07 | 1 |
myeloma | 4.97e-07 | 1 |