FFCP PHASE1:Hg19::chr2:239066313..239066357,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:239066313..239066357,+ | |||
|coexpression_cluster_id=C117 | |coexpression_cluster_id=C117 | ||
|description=CAGE_peak_at_chr2:239066313..239066357,+ | |description=CAGE_peak_at_chr2:239066313..239066357,+ | ||
|id=chr2:239066313..239066357,+ | |id=chr2:239066313..239066357,+ | ||
|ontology_enrichment_celltype=CL:0000313;1.23e-66;1!CL:0000159;3.61e-34;2!CL:0002149;2.74e-12;6!CL:0002255;2.74e-12;6 | |ontology_enrichment_celltype=CL:1000507!1.88e-27!12;CL:1000494!1.88e-27!12;CL:1000449!1.29e-20!16;CL:1000497!2.47e-18!18;CL:0002518!2.47e-18!18;CL:0002681!1.82e-16!13;CL:0002584!1.82e-16!13;CL:0000313!4.73e-15!1;CL:0002149!5.94e-10!6;CL:0002255!5.94e-10!6;CL:0000159!3.56e-08!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000313;1.23e-66;1!CL:0000159;3.61e-34;2!CL:0002149;2.74e-12;6!CL:0002255;2.74e-12;6 | ||
|ontology_enrichment_disease=DOID:2152;1.23e-66;1!DOID:5409;8.69e-18;4!DOID:3001;2.74e-12;6!DOID:299;1.09e-11;25!DOID:120;6.56e-11;27!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:193;3.10e-10;29!DOID:3905;1.12e-08;9 | |ontology_enrichment_celltype_v019_2=CL:0000313,1.23e-66,1;CL:0000159,3.61e-34,2;CL:0002149,2.74e-12,6;CL:0002255,2.74e-12,6 | ||
|ontology_enrichment_uberon=UBERON:0004911;1.23e-66;1!UBERON:0004909;3.61e-34;2!UBERON:0003134;1.26e-08;33!UBERON:0000474;2.21e-08;37!UBERON:0003133;5.64e-08;44!UBERON:0003100;5.64e-08;41 | |ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10 | ||
|ontology_enrichment_disease=DOID:2152!4.73e-15!1;DOID:3001!5.94e-10!6;DOID:299!6.71e-09!25;DOID:3493!5.74e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.23e-66;1!DOID:5409;8.69e-18;4!DOID:3001;2.74e-12;6!DOID:299;1.09e-11;25!DOID:120;6.56e-11;27!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:193;3.10e-10;29!DOID:3905;1.12e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.23e-66,1;DOID:5409,8.69e-18,4;DOID:3001,2.74e-12,6;DOID:299,1.09e-11,25;DOID:120,6.56e-11,27;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:193,3.10e-10,29;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.88e-27!12;UBERON:0001231!1.88e-27!12;UBERON:0004810!1.88e-27!12;UBERON:0002113!2.32e-23!27;UBERON:0003918!2.32e-23!27;UBERON:0005095!2.32e-23!27;UBERON:0007687!2.32e-23!27;UBERON:0004211!1.29e-20!16;UBERON:0001285!1.29e-20!16;UBERON:0007684!1.29e-20!16;UBERON:0003220!1.29e-20!16;UBERON:0004208!1.29e-20!16;UBERON:0000489!1.21e-19!32;UBERON:0006555!2.08e-19!17;UBERON:0005103!2.08e-19!17;UBERON:0000083!2.08e-19!17;UBERON:0009201!2.08e-19!17;UBERON:0004819!2.08e-19!17;UBERON:0006553!2.08e-19!17;UBERON:0003074!2.08e-19!17;UBERON:0003060!2.08e-19!17;UBERON:0000080!2.47e-18!18;UBERON:0002120!2.47e-18!18;UBERON:0004875!2.47e-18!18;UBERON:0005721!2.47e-18!18;UBERON:0005754!2.47e-18!18;UBERON:0007297!2.47e-18!18;UBERON:0000058!6.18e-18!26;UBERON:0004876!1.66e-16!20;UBERON:0001225!1.82e-16!13;UBERON:0008987!1.82e-16!13;UBERON:0003887!1.01e-15!21;UBERON:0004911!4.73e-15!1;UBERON:0005418!8.17e-15!1;UBERON:0001389!8.17e-15!1;UBERON:0000026!8.17e-15!1;UBERON:0008784!8.17e-15!1;UBERON:0006058!8.17e-15!1;UBERON:0003663!8.17e-15!1;UBERON:0001383!8.17e-15!1;UBERON:0004256!8.17e-15!1;UBERON:0002529!8.17e-15!1;UBERON:0004708!8.17e-15!1;UBERON:0002101!8.17e-15!1;UBERON:0004709!8.17e-15!1;UBERON:0003661!8.17e-15!1;UBERON:0002471!8.17e-15!1;UBERON:0004357!8.17e-15!1;UBERON:0009872!8.17e-15!1;UBERON:0004347!8.17e-15!1;UBERON:0005420!8.17e-15!1;UBERON:0005732!8.17e-15!1;UBERON:0006057!8.17e-15!1;UBERON:0000978!8.17e-15!1;UBERON:0002103!8.17e-15!1;UBERON:0001665!8.17e-15!1;UBERON:0003823!8.17e-15!1;UBERON:0000154!8.17e-15!1;UBERON:0005733!8.17e-15!1;UBERON:0005730!8.17e-15!1;UBERON:0006554!3.72e-14!44;UBERON:0001008!7.87e-14!45;UBERON:0001851!1.94e-13!16;UBERON:0000353!1.15e-12!17;UBERON:0005172!3.21e-11!55;UBERON:0005173!3.21e-11!55;UBERON:0002417!4.61e-10!61;UBERON:0000916!4.61e-10!61;UBERON:0003064!6.51e-09!37;UBERON:0003103!7.88e-09!69;UBERON:0004909!3.56e-08!2;UBERON:0001630!4.69e-08!2;UBERON:0005090!4.69e-08!2;UBERON:0003886!2.71e-07!63;UBERON:0005177!3.78e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.23e-66;1!UBERON:0004909;3.61e-34;2!UBERON:0003134;1.26e-08;33!UBERON:0000474;2.21e-08;37!UBERON:0003133;5.64e-08;44!UBERON:0003100;5.64e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.23e-66,1;UBERON:0004909,3.61e-34,2;UBERON:0003134,2.92e-08,37;UBERON:0000474,2.92e-08,37;UBERON:0003100,1.47e-07,41 | |||
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|short_description=p@chr2:239066313..239066357,+ | |short_description=p@chr2:239066313..239066357,+ | ||
}} | }} |
Latest revision as of 08:19, 29 July 2015
Short description: | p@chr2:239066313..239066357, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:239066313..239066357, + |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.23e-66 | 1 |
seromucus secreting cell | 3.61e-34 | 2 |
epithelial cell of uterus | 2.74e-12 | 6 |
stromal cell of endometrium | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.23e-66 | 1 |
epithelium of gonad | 3.61e-34 | 2 |
female reproductive organ | 2.92e-08 | 37 |
female reproductive system | 2.92e-08 | 37 |
female organism | 1.47e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.23e-66 | 1 |
lung small cell carcinoma | 8.69e-18 | 4 |
female reproductive endometrioid cancer | 2.74e-12 | 6 |
adenocarcinoma | 1.09e-11 | 25 |
female reproductive organ cancer | 6.56e-11 | 27 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
reproductive organ cancer | 3.10e-10 | 29 |
lung carcinoma | 1.12e-08 | 9 |