FFCP PHASE1:Hg19::chr2:234699458..234699476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:234699458..234699476,+ | |||
|coexpression_cluster_id=C145 | |coexpression_cluster_id=C145 | ||
|description=CAGE_peak_at_chr2:234699458..234699476,+ | |description=CAGE_peak_at_chr2:234699458..234699476,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.81e-40;5!CL:0002321;2.58e-14;15 | |ontology_enrichment_celltype_v019=CL:0000333;1.81e-40;5!CL:0002321;2.58e-14;15 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:171!2.24e-88!10;DOID:3095!2.00e-40!22;DOID:2994!2.00e-40!22;DOID:169!1.03e-17!6;DOID:3193!7.30e-14!2;DOID:962!7.30e-14!2;DOID:1192!1.10e-09!3 | |ontology_enrichment_disease=DOID:171!2.24e-88!10;DOID:3095!2.00e-40!22;DOID:2994!2.00e-40!22;DOID:169!1.03e-17!6;DOID:3193!7.30e-14!2;DOID:962!7.30e-14!2;DOID:1192!1.10e-09!3 | ||
|ontology_enrichment_disease_v019=DOID:171;4.85e-45;10!DOID:169;5.98e-34;6!DOID:3193;5.56e-26;2!DOID:962;5.56e-26;2!DOID:3095;4.27e-21;22!DOID:2994;4.27e-21;22!DOID:1192;8.00e-18;3 | |ontology_enrichment_disease_v019=DOID:171;4.85e-45;10!DOID:169;5.98e-34;6!DOID:3193;5.56e-26;2!DOID:962;5.56e-26;2!DOID:3095;4.27e-21;22!DOID:2994;4.27e-21;22!DOID:1192;8.00e-18;3 | ||
|ontology_enrichment_disease_v019_2=DOID:171,4.85e-45,10;DOID:169,5.98e-34,6;DOID:3193,5.56e-26,2;DOID:962,5.56e-26,2;DOID:3095,4.27e-21,22;DOID:2994,4.27e-21,22;DOID:1192,8.00e-18,3 | |||
|ontology_enrichment_uberon=UBERON:0000013!4.92e-21!5;UBERON:0002410!4.92e-21!5;UBERON:0003714!7.30e-14!2;UBERON:0000010!3.74e-12!8;UBERON:0000924!7.16e-07!173;UBERON:0006601!7.16e-07!173 | |ontology_enrichment_uberon=UBERON:0000013!4.92e-21!5;UBERON:0002410!4.92e-21!5;UBERON:0003714!7.30e-14!2;UBERON:0000010!3.74e-12!8;UBERON:0000924!7.16e-07!173;UBERON:0006601!7.16e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.81e-40;5!UBERON:0002410;1.81e-40;5!UBERON:0003714;5.56e-26;2!UBERON:0000010;4.59e-23;8!UBERON:0002346;1.29e-13;4!UBERON:0000923;1.29e-13;4!UBERON:0010316;1.29e-13;4!UBERON:0005291;1.29e-13;4!UBERON:0002050;3.60e-11;5!UBERON:0005423;3.60e-11;5 | |ontology_enrichment_uberon_v019=UBERON:0000013;1.81e-40;5!UBERON:0002410;1.81e-40;5!UBERON:0003714;5.56e-26;2!UBERON:0000010;4.59e-23;8!UBERON:0002346;1.29e-13;4!UBERON:0000923;1.29e-13;4!UBERON:0010316;1.29e-13;4!UBERON:0005291;1.29e-13;4!UBERON:0002050;3.60e-11;5!UBERON:0005423;3.60e-11;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.81e-40,5;UBERON:0002410,1.81e-40,5;UBERON:0003714,5.56e-26,2;UBERON:0000010,4.59e-23,8 | |||
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|short_description=p@chr2:234699458..234699476,+ | |short_description=p@chr2:234699458..234699476,+ | ||
}} | }} |
Latest revision as of 07:58, 29 July 2015
Short description: | p@chr2:234699458..234699476, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:234699458..234699476, + |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.81e-40 | 5 |
autonomic nervous system | 1.81e-40 | 5 |
neural tissue | 5.56e-26 | 2 |
peripheral nervous system | 4.59e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.85e-45 | 10 |
neuroendocrine tumor | 5.98e-34 | 6 |
peripheral nerve sheath neoplasm | 5.56e-26 | 2 |
neurofibroma | 5.56e-26 | 2 |
germ cell and embryonal cancer | 4.27e-21 | 22 |
germ cell cancer | 4.27e-21 | 22 |
peripheral nervous system neoplasm | 8.00e-18 | 3 |