FFCP PHASE1:Hg19::chr2:232548018..232548022,-: Difference between revisions
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|id=chr2:232548018..232548022,-
|short_description=p@chr2:232548018..232548022,-
|description=CAGE_peak_at_chr2:232548018..232548022,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:232548018..232548022,- | |||
|coexpression_cluster_id=C648 | |||
|description=CAGE_peak_at_chr2:232548018..232548022,- | |||
|id=chr2:232548018..232548022,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.55e-98;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr2:232548018..232548022,- | |||
}} | }} |
Latest revision as of 07:41, 29 July 2015
Short description: | p@chr2:232548018..232548022, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:232548018..232548022, - |
Coexpression cluster: | C648_caudate_corpus_diencephalon_medulla_occipital_nucleus_thalamus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 9.37e-99 | 1 |
central nervous system cell part cluster | 9.37e-99 | 1 |
axon tract | 9.37e-99 | 1 |
intercerebral commissure | 9.37e-99 | 1 |
dorsal telencephalic commissure | 9.37e-99 | 1 |
brain white matter | 9.37e-99 | 1 |
brain commissure | 9.37e-99 | 1 |
white matter | 9.37e-99 | 1 |
nervous system commissure | 9.37e-99 | 1 |
cerebral hemisphere white matter | 9.37e-99 | 1 |
multi cell component structure | 2.74e-50 | 2 |
neuron projection bundle | 2.74e-50 | 2 |
diencephalon | 1.91e-15 | 7 |
future diencephalon | 1.91e-15 | 7 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |