FFCP PHASE1:Hg19::chr2:232106599..232106613,-: Difference between revisions
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|id=chr2:232106599..232106613,-
|short_description=p@chr2:232106599..232106613,-
|description=CAGE_peak_at_chr2:232106599..232106613,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:232106599..232106613,- | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_at_chr2:232106599..232106613,- | |||
|id=chr2:232106599..232106613,- | |||
|ontology_enrichment_celltype=CL:0000557!4.51e-22!71;CL:0000839!6.55e-21!70;CL:0002009!2.53e-20!65;CL:0000766!6.86e-20!76;CL:0002194!1.29e-19!63;CL:0000576!1.29e-19!63;CL:0000040!1.29e-19!63;CL:0000559!1.29e-19!63;CL:0000763!4.36e-17!112;CL:0000049!4.36e-17!112;CL:0002057!3.74e-10!42;CL:0002031!3.03e-09!124;CL:0000037!3.27e-09!172;CL:0000566!3.27e-09!172;CL:0000860!3.73e-09!45;CL:0002032!1.15e-08!165;CL:0000837!1.15e-08!165;CL:0000738!1.69e-08!140;CL:0000988!4.14e-08!182;CL:0002087!8.07e-08!119;CL:0002619!1.95e-07!3;CL:0000235!2.05e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;9.64e-49;6!CL:0002619;1.64e-25;3!CL:0000037;1.99e-09;1!CL:0001024;1.99e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,9.68e-49,6;CL:0002619,1.71e-25,3;CL:0002194,4.37e-12,59;CL:0000576,4.37e-12,59;CL:0000040,4.37e-12,59;CL:0000559,4.37e-12,59;CL:0002009,1.21e-11,61;CL:0000839,1.18e-10,66;CL:0000557,1.79e-10,67;CL:0000766,1.21e-09,72;CL:0001024,2.16e-09,1;CL:0000763,3.34e-07,108;CL:0000049,3.34e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.43e-09;1!UBERON:0010227;3.67e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.25e-20!80;UBERON:0001474!8.13e-18!86;UBERON:0002390!2.08e-17!102;UBERON:0003061!2.08e-17!102;UBERON:0002193!7.49e-17!112;UBERON:0002405!3.51e-16!115;UBERON:0004765!1.13e-13!101;UBERON:0001434!1.13e-13!101;UBERON:0007023!1.69e-12!115;UBERON:0002204!8.01e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.43e-09;1!UBERON:0007029;3.67e-09;1!UBERON:0002079;3.67e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.09e-11,76;UBERON:0001474,4.34e-10,82;UBERON:0002363,1.43e-09,1;UBERON:0007645,1.43e-09,1;UBERON:0007647,1.43e-09,1;UBERON:0010115,1.43e-09,1;UBERON:0007029,3.00e-09,1;UBERON:0002079,3.53e-09,1;UBERON:0004765,4.88e-09,90;UBERON:0002405,1.09e-08,93;UBERON:0002390,3.70e-08,98;UBERON:0003061,3.70e-08,98;UBERON:0001434,5.84e-08,100;UBERON:0002193,3.06e-07,108 | |||
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| ||
|short_description=p@chr2:232106599..232106613,- | |||
}} | }} |
Latest revision as of 07:37, 29 July 2015
Short description: | p@chr2:232106599..232106613, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:232106599..232106613, - |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 9.68e-49 | 6 |
adult endothelial progenitor cell | 1.71e-25 | 3 |
monopoietic cell | 4.37e-12 | 59 |
monocyte | 4.37e-12 | 59 |
monoblast | 4.37e-12 | 59 |
promonocyte | 4.37e-12 | 59 |
macrophage dendritic cell progenitor | 1.21e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.18e-10 | 66 |
granulocyte monocyte progenitor cell | 1.79e-10 | 67 |
myeloid leukocyte | 1.21e-09 | 72 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.16e-09 | 1 |
myeloid cell | 3.34e-07 | 108 |
common myeloid progenitor | 3.34e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.09e-11 | 76 |
bone element | 4.34e-10 | 82 |
dura mater | 1.43e-09 | 1 |
future meninx | 1.43e-09 | 1 |
ectomeninx | 1.43e-09 | 1 |
future dura mater | 1.43e-09 | 1 |
surface | 3.00e-09 | 1 |
left cardiac atrium | 3.53e-09 | 1 |
skeletal element | 4.88e-09 | 90 |
immune system | 1.09e-08 | 93 |
hematopoietic system | 3.70e-08 | 98 |
blood island | 3.70e-08 | 98 |
skeletal system | 5.84e-08 | 100 |
hemolymphoid system | 3.06e-07 | 108 |