FFCP PHASE1:Hg19::chr2:230450858..230450884,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:230450858..230450884,- | |||
|coexpression_cluster_id=C225 | |||
|description=CAGE_peak_at_chr2:230450858..230450884,- | |description=CAGE_peak_at_chr2:230450858..230450884,- | ||
|id=chr2:230450858..230450884,- | |id=chr2:230450858..230450884,- | ||
|ontology_enrichment_celltype=CL:0002623!6.34e-09!3 | |ontology_enrichment_celltype=CL:0002623!6.34e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002623;8.91e-29;3!CL:0000622;1.58e-17;5!CL:0000154;1.05e-14;6!CL:0002573;8.87e-13;2!CL:0000150;5.57e-10;9!CL:0002537;2.19e-08;5!CL:0000349;6.55e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,8.92e-29,3;CL:0000622,1.58e-17,5;CL:0000154,1.05e-14,6;CL:0002573,8.35e-13,2;CL:0000150,5.57e-10,9;CL:0002537,2.19e-08,5;CL:0000349,6.43e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.29e-10;1!UBERON:0007123;2.73e-08;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;7.40e-11;1!DOID:3165;7.40e-11;1!DOID:0060121;7.40e-11;1!DOID:2438;7.40e-11;1!DOID:4418;7.40e-11;1!DOID:6193;3.29e-10;1!DOID:1115;2.11e-07;20!DOID:201;4.00e-07;6!DOID:0060100;4.00e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,7.40e-11,1;DOID:3165,7.40e-11,1;DOID:0060121,7.40e-11,1;DOID:2438,7.40e-11,1;DOID:4418,7.40e-11,1;DOID:6193,2.28e-10,1;DOID:1115,2.42e-07,20;DOID:201,4.00e-07,6;DOID:0060100,4.00e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.04e-08!14;UBERON:0000158!6.04e-08!14;UBERON:0002418!1.02e-07!3;UBERON:0004755!1.02e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!6.04e-08!14;UBERON:0000158!6.04e-08!14;UBERON:0002418!1.02e-07!3;UBERON:0004755!1.02e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.05e-14;6!UBERON:0003293;1.05e-14;6!UBERON:0003294;1.05e-14;6!UBERON:0010047;1.05e-14;6!UBERON:0003408;1.05e-14;6!UBERON:0000167;1.05e-14;6!UBERON:0000941;3.29e-10;1!UBERON:0001785;3.29e-10;1!UBERON:0002464;3.29e-10;1!UBERON:0004904;3.29e-10;1!UBERON:0001021;3.29e-10;1!UBERON:0000010;1.95e-09;8!UBERON:0005631;8.27e-09;10!UBERON:0000158;8.27e-09;10!UBERON:0002046;2.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.05e-14,6;UBERON:0003293,1.05e-14,6;UBERON:0003294,1.05e-14,6;UBERON:0010047,1.05e-14,6;UBERON:0000167,1.05e-14,6;UBERON:0005631,1.09e-10,14;UBERON:0000158,1.09e-10,14;UBERON:0000941,2.74e-10,1;UBERON:0001785,2.74e-10,1;UBERON:0002464,2.74e-10,1;UBERON:0004904,2.74e-10,1;UBERON:0001021,2.74e-10,1;UBERON:0003902,2.74e-10,1;UBERON:0005425,2.74e-10,1;UBERON:0000010,1.78e-09,8;UBERON:0003408,4.96e-09,10;UBERON:0002046,2.63e-08,5;UBERON:0004117,2.63e-08,5;UBERON:0007689,2.63e-08,5;UBERON:0007123,2.63e-08,5;UBERON:0003091,2.63e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0.866364470720326,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14940454486836,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72814814301633,0,0,0,0,0,0,0,0,0,0,0,0,1.55776328755086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.413509717453592,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,6.20735660317994,0,4.91457123358771,0,0.703347082052564,2.56010021552684,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.230850775511391,0.227884111694002,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,41.758225279864,0,0,0,0,0,0,0,0,0,0,0,1.24807205711825,0,0,0,0.52418000472609,1.89184635718778,0,0,0,0,0.264768380074501,0,2.05562886970126,18.679173500081,0,0,0.0801588202515337,0,0,0,0,0,0,0.869767748958028,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465788870628778,0.414706207840855,0,0.521745061811734,0,0,0,0,0.322231671127465,0,0,0.400027764663154,0,0,0,0.963099152036517,0,0.521988583930423,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20927140302209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.682986574053893,0.266107110487916,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,11.396889028967,16.2182553239252,9.67763526539729,0,1.30165200803622,1.27820107138737,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0,0,0,3.02756028967656,0,0,0,0,0,0.215166616178029,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0.866364470720326,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14940454486836,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72814814301633,0,0,0,0,0,0,0,0,0,0,0,0,1.55776328755086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.413509717453592,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,6.20735660317994,0,4.91457123358771,0,0.703347082052564,2.56010021552684,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.230850775511391,0.227884111694002,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,41.758225279864,0,0,0,0,0,0,0,0,0,0,0,1.24807205711825,0,0,0,0.52418000472609,1.89184635718778,0,0,0,0,0.264768380074501,0,2.05562886970126,18.679173500081,0,0,0.0801588202515337,0,0,0,0,0,0,0.869767748958028,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465788870628778,0.414706207840855,0,0.521745061811734,0,0,0,0,0.322231671127465,0,0,0.400027764663154,0,0,0,0.963099152036517,0,0.521988583930423,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20927140302209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.682986574053893,0.266107110487916,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,11.396889028967,16.2182553239252,9.67763526539729,0,1.30165200803622,1.27820107138737,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0,0,0,3.02756028967656,0,0,0,0,0,0.215166616178029,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:230450858..230450884,- | |short_description=p@chr2:230450858..230450884,- | ||
}} | }} |
Latest revision as of 07:29, 29 July 2015
Short description: | p@chr2:230450858..230450884, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:230450858..230450884, - |
Coexpression cluster: | C225_ductal_alveolar_giant_prostate_salivary_squamous_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 8.92e-29 | 3 |
acinar cell | 1.58e-17 | 5 |
protein secreting cell | 1.05e-14 | 6 |
Schwann cell | 8.35e-13 | 2 |
glandular epithelial cell | 5.57e-10 | 9 |
amnion mesenchymal stem cell | 2.19e-08 | 5 |
extraembryonic cell | 6.43e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.05e-14 | 6 |
gland of oral region | 1.05e-14 | 6 |
gland of foregut | 1.05e-14 | 6 |
oral gland | 1.05e-14 | 6 |
oral cavity | 1.05e-14 | 6 |
extraembryonic membrane | 1.09e-10 | 14 |
membranous layer | 1.09e-10 | 14 |
cranial nerve II | 2.74e-10 | 1 |
cranial nerve | 2.74e-10 | 1 |
nerve trunk | 2.74e-10 | 1 |
nerve connecting eye with brain | 2.74e-10 | 1 |
nerve | 2.74e-10 | 1 |
retinal neural layer | 2.74e-10 | 1 |
presumptive neural retina | 2.74e-10 | 1 |
peripheral nervous system | 1.78e-09 | 8 |
gland of gut | 4.96e-09 | 10 |
thyroid gland | 2.63e-08 | 5 |
pharyngeal pouch | 2.63e-08 | 5 |
thyroid diverticulum | 2.63e-08 | 5 |
pharyngeal pouch 2 | 2.63e-08 | 5 |
thyroid primordium | 2.63e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 7.40e-11 | 1 |
skin benign neoplasm | 7.40e-11 | 1 |
integumentary system benign neoplasm | 7.40e-11 | 1 |
dermis tumor | 7.40e-11 | 1 |
cutaneous fibrous histiocytoma | 7.40e-11 | 1 |
epithelioid sarcoma | 2.28e-10 | 1 |
sarcoma | 2.42e-07 | 20 |
connective tissue cancer | 4.00e-07 | 6 |
musculoskeletal system cancer | 4.00e-07 | 6 |