FFCP PHASE1:Hg19::chr2:217540148..217540164,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:217540148..217540164,- | |||
|coexpression_cluster_id=C252 | |||
|description=CAGE_peak_at_chr2:217540148..217540164,- | |description=CAGE_peak_at_chr2:217540148..217540164,- | ||
|id=chr2:217540148..217540164,- | |id=chr2:217540148..217540164,- | ||
|ontology_enrichment_celltype=CL:0000055!1.99e-07!180 | |ontology_enrichment_celltype=CL:0000055!1.99e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000327;1.22e-13;15!CL:0000153;2.91e-13;9!CL:0000447;2.91e-13;9!CL:0000499;6.53e-13;28!CL:0002615;4.75e-11;3!CL:0000197;2.23e-10;6!CL:0000098;2.23e-10;6!CL:0002167;2.23e-10;6!CL:0000138;5.01e-09;6!CL:0002195;4.26e-08;2!CL:0002571;4.26e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000327,1.36e-13,15;CL:0000153,3.73e-13,9;CL:0000447,3.73e-13,9;CL:0000499,7.12e-13,28;CL:0002615,4.44e-11,3;CL:0000197,2.46e-10,6;CL:0000098,2.46e-10,6;CL:0002167,2.46e-10,6;CL:0000058,6.39e-09,6;CL:0000138,6.39e-09,6;CL:0002195,3.98e-08,2;CL:0002571,3.98e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.18e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.92e-12;3!DOID:127;1.92e-12;3!DOID:0060072;2.00e-09;4!DOID:3307;3.70e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.85e-12,3;DOID:127,1.85e-12,3;DOID:0060072,1.95e-09,4;DOID:3307,2.68e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.35e-07!6;UBERON:0002358!1.35e-07!6;UBERON:0003684!1.35e-07!6;UBERON:0001178!1.35e-07!6;UBERON:0001443!8.37e-07!11 | |ontology_enrichment_uberon=UBERON:0003688!1.35e-07!6;UBERON:0002358!1.35e-07!6;UBERON:0003684!1.35e-07!6;UBERON:0001178!1.35e-07!6;UBERON:0001443!8.37e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.67e-14;9!UBERON:0000042;5.67e-14;9!UBERON:0003688;9.94e-10;6!UBERON:0002358;9.94e-10;6!UBERON:0003684;9.94e-10;6!UBERON:0001178;9.94e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,2.48e-10,12;UBERON:0000042,2.48e-10,12;UBERON:0003688,9.09e-10,6;UBERON:0002358,9.09e-10,6;UBERON:0003684,9.09e-10,6;UBERON:0001178,9.09e-10,6;UBERON:0005156,2.06e-07,59;UBERON:0000990,2.06e-07,59 | |||
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|phase1_expression=0.54503513781167,2.14100523890983,2.11431606143957,2.00146596706261,1.78784437770915,3.48935409640147,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,1.73815822752988,0.795285947051099,1.45990461090791,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.926864265692532,0.573673241497627,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0.494533858557114,0,1.43723628363248,0,0,0,0,0,0.901428353439581,0,0,0.640672166455702,3.60284231971255,0,0.206105058476878,0.257640540045629,0.37223371266318,0,0.194874010322397,0.504867548488229,0.828449087780694,1.93975268182574,0.710019185033229,0.604512589365842,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,1.86156681609409,0,0,0,0,2.57360388584666,0,0,0,2.13235169245527,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,4.36738809214695,5.70972764150918,3.78485796081443,3.16281820480326,0.300946099727719,0,0,0,0,0,1.17480694477644,0,0,0,0,0,0,0,1.48864684691266,0.153461973288062,0.561320188866147,0.768834895534206,0.511707249066704,4.98647155545183,0,0,0,0.164254312027618,0,0,0,0,0,2.18147451512753,2.54927635209404,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,2.83331112147576,0,0,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0.855877976067841,0.636406495851874,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,2.11300293513511,0.682499557039929,4.52497382251881,1.13008116620243,0,1.32687795048244,1.31535265576129,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,3.79993743535795,3.29294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,1.18785872333055,0,0,0.140669416410513,0,0,0.422250816255987,0.398495976502139,0,0,0.20453736500431,0,1.86623752597084,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.262379999988587,0.724999575434793,0,0,0,0,0.874813840149763,0,0,0,0,0,0.295547618953547,0,0,0,1.38510465306835,0.683652335082007,0,0,0,0.638002319463839,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0.126621591911757,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,3.2639429643623,0,0,0,0,3.86788897277961,0,0.837847203816763,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.134366944973453,10.4486966227297,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.314727528809989,0,0,0,0,0,0.25426853765475,4.88699641578341,6.04955043840887,6.85833456229759,0,0.082092520749339,0.511164065356265,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0.467426619694449,0.554805861502613,0,0,0,0,0.151230923763239,0,0.147855149989634,0.318593534327405,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0.727394636810238,0.107410557042488,1.39210127963548,3.58286299828754,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0.636008701306837,0,0,3.87943538059752,8.88111884324281,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,1.20336525358812,0,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,3.47347824872506,0,0,0.535701835878287,0,0,0.227662191351298,0.177404740325278,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0.431855182437243,0,0.857718530119876,0,0,0.347716544605159,4.00855682365126,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.102662806856247,3.4794432940146,1.45713297917742,0.233939463462106,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.8453114551668,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,3.46101249699031,0,0,0,0,0,0,0,0.454672189309436,0,0,0.20686599172379,0.426467963801962,0,0,0,0,0.445530107947154,0,0.435433495793923,0,0,0.0717222053926763,0.665320713092027,0,0,1.9307228228694,0,0,0.488965776731466,0.406896178315738,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| ||
|short_description=p@chr2:217540148..217540164,- | |short_description=p@chr2:217540148..217540164,- | ||
}} | }} |
Latest revision as of 06:26, 29 July 2015
Short description: | p@chr2:217540148..217540164, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:217540148..217540164, - |
Coexpression cluster: | C252_hepatic_Olfactory_sacrococcigeal_leiomyoma_normal_Synoviocyte_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 1.36e-13 | 15 |
GAG secreting cell | 3.73e-13 | 9 |
carbohydrate secreting cell | 3.73e-13 | 9 |
stromal cell | 7.12e-13 | 28 |
adipocyte of omentum tissue | 4.44e-11 | 3 |
receptor cell | 2.46e-10 | 6 |
sensory epithelial cell | 2.46e-10 | 6 |
olfactory epithelial cell | 2.46e-10 | 6 |
chondroblast | 6.39e-09 | 6 |
chondrocyte | 6.39e-09 | 6 |
hepatic stem cell | 3.98e-08 | 2 |
hepatic mesenchymal stem cell | 3.98e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 2.48e-10 | 12 |
serous membrane | 2.48e-10 | 12 |
omentum | 9.09e-10 | 6 |
peritoneum | 9.09e-10 | 6 |
abdominal cavity | 9.09e-10 | 6 |
visceral peritoneum | 9.09e-10 | 6 |
reproductive structure | 2.06e-07 | 59 |
reproductive system | 2.06e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.85e-12 | 3 |
leiomyoma | 1.85e-12 | 3 |
benign neoplasm | 1.95e-09 | 4 |
teratoma | 2.68e-08 | 2 |