FFCP PHASE1:Hg19::chr2:217526641..217526672,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:217526641..217526672,+ | |||
|coexpression_cluster_id=C1891 | |coexpression_cluster_id=C1891 | ||
|description=CAGE_peak_at_chr2:217526641..217526672,+ | |description=CAGE_peak_at_chr2:217526641..217526672,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000449!8.73e-07!16 | |ontology_enrichment_celltype=CL:1000449!8.73e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.19e-07;15!CL:0000540;2.37e-07;6!CL:0000404;2.37e-07;6!CL:0002319;5.68e-07;25!CL:0002077;6.07e-07;34 | |ontology_enrichment_celltype_v019=CL:1000449;2.19e-07;15!CL:0000540;2.37e-07;6!CL:0000404;2.37e-07;6!CL:0002319;5.68e-07;25!CL:0002077;6.07e-07;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.32e-12,72;CL:0000133,1.46e-09,59;CL:0000047,1.28e-08,8;CL:0002321,8.97e-08,250;CL:0002077,1.29e-07,34;CL:0000540,1.70e-07,6;CL:0000031,1.70e-07,6;CL:0000404,1.70e-07,6;CL:1000449,2.28e-07,15;CL:0002319,5.78e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.37e-07;6 | |ontology_enrichment_development_v019=CL:0000031;2.37e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!2.52e-09!173;UBERON:0006601!2.52e-09!173;UBERON:0001444!1.75e-08!48;UBERON:0004121!2.70e-08!169;UBERON:0003887!1.63e-07!21;UBERON:0000080!2.01e-07!18;UBERON:0002120!2.01e-07!18;UBERON:0004875!2.01e-07!18;UBERON:0005721!2.01e-07!18;UBERON:0005754!2.01e-07!18;UBERON:0007297!2.01e-07!18;UBERON:0006555!2.40e-07!17;UBERON:0005103!2.40e-07!17;UBERON:0000083!2.40e-07!17;UBERON:0009201!2.40e-07!17;UBERON:0004819!2.40e-07!17;UBERON:0006553!2.40e-07!17;UBERON:0003074!2.40e-07!17;UBERON:0003060!2.40e-07!17;UBERON:0002200!7.15e-07!11;UBERON:0006876!7.15e-07!11;UBERON:0004876!7.62e-07!20;UBERON:0004211!8.73e-07!16;UBERON:0001285!8.73e-07!16;UBERON:0007684!8.73e-07!16;UBERON:0003220!8.73e-07!16;UBERON:0004208!8.73e-07!16 | |ontology_enrichment_uberon=UBERON:0000924!2.52e-09!173;UBERON:0006601!2.52e-09!173;UBERON:0001444!1.75e-08!48;UBERON:0004121!2.70e-08!169;UBERON:0003887!1.63e-07!21;UBERON:0000080!2.01e-07!18;UBERON:0002120!2.01e-07!18;UBERON:0004875!2.01e-07!18;UBERON:0005721!2.01e-07!18;UBERON:0005754!2.01e-07!18;UBERON:0007297!2.01e-07!18;UBERON:0006555!2.40e-07!17;UBERON:0005103!2.40e-07!17;UBERON:0000083!2.40e-07!17;UBERON:0009201!2.40e-07!17;UBERON:0004819!2.40e-07!17;UBERON:0006553!2.40e-07!17;UBERON:0003074!2.40e-07!17;UBERON:0003060!2.40e-07!17;UBERON:0002200!7.15e-07!11;UBERON:0006876!7.15e-07!11;UBERON:0004876!7.62e-07!20;UBERON:0004211!8.73e-07!16;UBERON:0001285!8.73e-07!16;UBERON:0007684!8.73e-07!16;UBERON:0003220!8.73e-07!16;UBERON:0004208!8.73e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;2.11e-10;11!UBERON:0000353;1.62e-07;15!UBERON:0006555;2.19e-07;15!UBERON:0004819;2.19e-07;15!UBERON:0001285;2.19e-07;15!UBERON:0007684;2.19e-07;15!UBERON:0001801;2.21e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0006876;2.11e-10;11!UBERON:0000353;1.62e-07;15!UBERON:0006555;2.19e-07;15!UBERON:0004819;2.19e-07;15!UBERON:0001285;2.19e-07;15!UBERON:0007684;2.19e-07;15!UBERON:0001801;2.21e-07;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,2.43e-10,11;UBERON:0006555,3.16e-08,16;UBERON:0004819,3.16e-08,16;UBERON:0005631,4.96e-08,14;UBERON:0000158,4.96e-08,14;UBERON:0004121,8.32e-08,171;UBERON:0000924,8.32e-08,171;UBERON:0006601,8.32e-08,171;UBERON:0001801,1.20e-07,14;UBERON:0000353,2.18e-07,15;UBERON:0004211,2.28e-07,15;UBERON:0009773,2.28e-07,15;UBERON:0001231,2.28e-07,15;UBERON:0001285,2.28e-07,15;UBERON:0007684,2.28e-07,15;UBERON:0004208,2.28e-07,15 | |||
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| ||
|short_description=p@chr2:217526641..217526672,+ | |short_description=p@chr2:217526641..217526672,+ | ||
}} | }} |
Latest revision as of 06:24, 29 July 2015
Short description: | p@chr2:217526641..217526672, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:217526641..217526672, + |
Coexpression cluster: | C1891_Mesothelial_Placental_mesenchymal_Osteoblast_basal_leiomyoma_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.32e-12 | 72 |
neurectodermal cell | 1.46e-09 | 59 |
neuronal stem cell | 1.28e-08 | 8 |
embryonic cell | 8.97e-08 | 250 |
ecto-epithelial cell | 1.29e-07 | 34 |
neuron | 1.70e-07 | 6 |
neuroblast | 1.70e-07 | 6 |
electrically signaling cell | 1.70e-07 | 6 |
epithelial cell of nephron | 2.28e-07 | 15 |
neural cell | 5.78e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 2.43e-10 | 11 |
excretory tube | 3.16e-08 | 16 |
kidney epithelium | 3.16e-08 | 16 |
extraembryonic membrane | 4.96e-08 | 14 |
membranous layer | 4.96e-08 | 14 |
ectoderm-derived structure | 8.32e-08 | 171 |
ectoderm | 8.32e-08 | 171 |
presumptive ectoderm | 8.32e-08 | 171 |
anterior segment of eyeball | 1.20e-07 | 14 |
parenchyma | 2.18e-07 | 15 |
nephron epithelium | 2.28e-07 | 15 |
renal tubule | 2.28e-07 | 15 |
nephron tubule | 2.28e-07 | 15 |
nephron | 2.28e-07 | 15 |
uriniferous tubule | 2.28e-07 | 15 |
nephrogenic mesenchyme | 2.28e-07 | 15 |